RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
KTN1-216ENST00000554570 CLCN6P51797 869 aa13.2□□□□□ -0.3
KTN1-216ENST00000554570 GSE1Q14687 1217 aa13.2□□□□□ -0.3
KTN1-216ENST00000554570 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
KTN1-216ENST00000554570 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
KTN1-216ENST00000554570 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
KTN1-216ENST00000554570 GABBR2O75899 941 aa13.09□□□□□ -0.31
KTN1-216ENST00000554570 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
KTN1-216ENST00000554570 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
KTN1-216ENST00000554570 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
KTN1-216ENST00000554570 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
KTN1-216ENST00000554570 MAP3K13O43283 966 aa13.03□□□□□ -0.32
KTN1-216ENST00000554570 PYGBP11216 843 aa13.03□□□□□ -0.32
KTN1-216ENST00000554570 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
KTN1-216ENST00000554570 PKD2Q13563 968 aa12.98□□□□□ -0.33
KTN1-216ENST00000554570 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
KTN1-216ENST00000554570 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
KTN1-216ENST00000554570 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
KTN1-216ENST00000554570 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
KTN1-216ENST00000554570 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
KTN1-216ENST00000554570 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
KTN1-216ENST00000554570 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
KTN1-216ENST00000554570 TIE1P35590 1138 aa12.85□□□□□ -0.35
KTN1-216ENST00000554570 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
KTN1-216ENST00000554570 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
KTN1-216ENST00000554570 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
KTN1-216ENST00000554570 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
KTN1-216ENST00000554570 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
KTN1-216ENST00000554570 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
KTN1-216ENST00000554570 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
KTN1-216ENST00000554570 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
KTN1-216ENST00000554570 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
KTN1-216ENST00000554570 RGL2O15211 777 aa12.77□□□□□ -0.37
KTN1-216ENST00000554570 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
KTN1-216ENST00000554570 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
KTN1-216ENST00000554570 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
KTN1-216ENST00000554570 PSEN1P49768 467 aa12.75□□□□□ -0.37
KTN1-216ENST00000554570 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
KTN1-216ENST00000554570 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
KTN1-216ENST00000554570 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
KTN1-216ENST00000554570 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
KTN1-216ENST00000554570 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
KTN1-216ENST00000554570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
KTN1-216ENST00000554570 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
KTN1-216ENST00000554570 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
KTN1-216ENST00000554570 C7P10643 843 aa12.63□□□□□ -0.39
KTN1-216ENST00000554570 IER5LQ5T953 404 aa12.63□□□□□ -0.39
KTN1-216ENST00000554570 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
KTN1-216ENST00000554570 STK25O00506 426 aa12.57□□□□□ -0.4
KTN1-216ENST00000554570 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
KTN1-216ENST00000554570 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
KTN1-216ENST00000554570 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
KTN1-216ENST00000554570 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
KTN1-216ENST00000554570 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
KTN1-216ENST00000554570 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
KTN1-216ENST00000554570 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
KTN1-216ENST00000554570 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
KTN1-216ENST00000554570 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
KTN1-216ENST00000554570 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
KTN1-216ENST00000554570 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
KTN1-216ENST00000554570 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
KTN1-216ENST00000554570 SOX12O15370 315 aa12.48□□□□□ -0.41
KTN1-216ENST00000554570 SEC24BO95487 1268 aa12.48□□□□□ -0.41
KTN1-216ENST00000554570 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
KTN1-216ENST00000554570 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
KTN1-216ENST00000554570 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
KTN1-216ENST00000554570 PLCG2P16885 1265 aa12.45□□□□□ -0.42
KTN1-216ENST00000554570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.424e-12■■■■■ 39.2
KTN1-216ENST00000554570 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
KTN1-216ENST00000554570 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
KTN1-216ENST00000554570 LHX8Q68G74 356 aa12.4□□□□□ -0.42
KTN1-216ENST00000554570 NLRP6P59044 892 aa12.38□□□□□ -0.43
KTN1-216ENST00000554570 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
KTN1-216ENST00000554570 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
KTN1-216ENST00000554570 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
KTN1-216ENST00000554570 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
KTN1-216ENST00000554570 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
KTN1-216ENST00000554570 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
KTN1-216ENST00000554570 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
KTN1-216ENST00000554570 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
KTN1-216ENST00000554570 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
KTN1-216ENST00000554570 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
KTN1-216ENST00000554570 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
KTN1-216ENST00000554570 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
KTN1-216ENST00000554570 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
KTN1-216ENST00000554570 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
KTN1-216ENST00000554570 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
KTN1-216ENST00000554570 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
KTN1-216ENST00000554570 G3V3G9 751 aa12.21□□□□□ -0.45
KTN1-216ENST00000554570 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
KTN1-216ENST00000554570 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
KTN1-216ENST00000554570 PPP1R37O75864 691 aa12.18□□□□□ -0.46
KTN1-216ENST00000554570 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
KTN1-216ENST00000554570 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
KTN1-216ENST00000554570 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
KTN1-216ENST00000554570 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
KTN1-216ENST00000554570 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
KTN1-216ENST00000554570 TMEM92Q6UXU6 159 aa12.04□□□□□ -0.48
KTN1-216ENST00000554570 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
KTN1-216ENST00000554570 KIF3CO14782 793 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms