RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
SLC38A6-219ENST00000554498 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
SLC38A6-219ENST00000554498 C7P10643 843 aa14.36□□□□□ -0.11
SLC38A6-219ENST00000554498 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
SLC38A6-219ENST00000554498 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
SLC38A6-219ENST00000554498 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
SLC38A6-219ENST00000554498 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
SLC38A6-219ENST00000554498 SCUBE2Q9NQ36 999 aa14.24□□□□□ -0.13
SLC38A6-219ENST00000554498 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
SLC38A6-219ENST00000554498 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
SLC38A6-219ENST00000554498 ATN1P54259 1190 aaPredicted RBP14.2□□□□□ -0.14
SLC38A6-219ENST00000554498 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
SLC38A6-219ENST00000554498 PROM2Q8N271 834 aa14.15□□□□□ -0.14
SLC38A6-219ENST00000554498 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
SLC38A6-219ENST00000554498 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
SLC38A6-219ENST00000554498 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
SLC38A6-219ENST00000554498 TIE1P35590 1138 aa14.08□□□□□ -0.16
SLC38A6-219ENST00000554498 MAP3K13O43283 966 aa14.06□□□□□ -0.16
SLC38A6-219ENST00000554498 LCE2DQ5TA82 110 aaPredicted RBP14.06□□□□□ -0.16
SLC38A6-219ENST00000554498 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
SLC38A6-219ENST00000554498 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
SLC38A6-219ENST00000554498 MIER1Q8N108 512 aa14.03□□□□□ -0.16
SLC38A6-219ENST00000554498 SEC24BO95487 1268 aa14.02□□□□□ -0.17
SLC38A6-219ENST00000554498 RASEFQ8IZ41 740 aa14□□□□□ -0.17
SLC38A6-219ENST00000554498 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
SLC38A6-219ENST00000554498 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
SLC38A6-219ENST00000554498 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
SLC38A6-219ENST00000554498 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
SLC38A6-219ENST00000554498 IER5LQ5T953 404 aa13.9□□□□□ -0.18
SLC38A6-219ENST00000554498 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
SLC38A6-219ENST00000554498 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
SLC38A6-219ENST00000554498 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
SLC38A6-219ENST00000554498 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.2
SLC38A6-219ENST00000554498 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
SLC38A6-219ENST00000554498 PLCG2P16885 1265 aa13.77□□□□□ -0.21
SLC38A6-219ENST00000554498 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
SLC38A6-219ENST00000554498 IFNL1Q8IU54 200 aa13.76□□□□□ -0.21
SLC38A6-219ENST00000554498 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
SLC38A6-219ENST00000554498 NUBP1P53384 320 aa13.75□□□□□ -0.21
SLC38A6-219ENST00000554498 ST18O60284 1047 aa13.71□□□□□ -0.21
SLC38A6-219ENST00000554498 IRX5P78411 483 aaPredicted RBP13.64□□□□□ -0.23
SLC38A6-219ENST00000554498 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
SLC38A6-219ENST00000554498 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
SLC38A6-219ENST00000554498 SNPHO15079 494 aa13.58□□□□□ -0.24
SLC38A6-219ENST00000554498 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
SLC38A6-219ENST00000554498 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
SLC38A6-219ENST00000554498 PYGBP11216 843 aa13.54□□□□□ -0.24
SLC38A6-219ENST00000554498 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
SLC38A6-219ENST00000554498 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
SLC38A6-219ENST00000554498 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
SLC38A6-219ENST00000554498 FKBP8Q14318 412 aa13.46□□□□□ -0.25
SLC38A6-219ENST00000554498 MARVELD3Q96A59 401 aa13.46□□□□□ -0.25
SLC38A6-219ENST00000554498 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
SLC38A6-219ENST00000554498 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
SLC38A6-219ENST00000554498 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
SLC38A6-219ENST00000554498 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
SLC38A6-219ENST00000554498 EMP3P54852 163 aa13.37□□□□□ -0.27
SLC38A6-219ENST00000554498 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
SLC38A6-219ENST00000554498 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
SLC38A6-219ENST00000554498 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
SLC38A6-219ENST00000554498 GSE1Q14687 1217 aa13.34□□□□□ -0.27
SLC38A6-219ENST00000554498 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
SLC38A6-219ENST00000554498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC38A6-219ENST00000554498 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
SLC38A6-219ENST00000554498 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
SLC38A6-219ENST00000554498 PSEN1P49768 467 aa13.24□□□□□ -0.29
SLC38A6-219ENST00000554498 KRTAP3-3Q9BYR6 98 aa13.21□□□□□ -0.29
SLC38A6-219ENST00000554498 KRTAP3-2Q9BYR7 98 aa13.21□□□□□ -0.29
SLC38A6-219ENST00000554498 G3V3G9 751 aa13.2□□□□□ -0.3
SLC38A6-219ENST00000554498 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
SLC38A6-219ENST00000554498 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
SLC38A6-219ENST00000554498 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
SLC38A6-219ENST00000554498 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
SLC38A6-219ENST00000554498 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
SLC38A6-219ENST00000554498 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
SLC38A6-219ENST00000554498 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
SLC38A6-219ENST00000554498 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
SLC38A6-219ENST00000554498 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
SLC38A6-219ENST00000554498 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
SLC38A6-219ENST00000554498 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
SLC38A6-219ENST00000554498 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
SLC38A6-219ENST00000554498 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
SLC38A6-219ENST00000554498 ERBB3P21860 1342 aa13.02□□□□□ -0.33
SLC38A6-219ENST00000554498 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
SLC38A6-219ENST00000554498 RIMBP2O15034 1052 aa13□□□□□ -0.33
SLC38A6-219ENST00000554498 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
SLC38A6-219ENST00000554498 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
SLC38A6-219ENST00000554498 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
SLC38A6-219ENST00000554498 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
SLC38A6-219ENST00000554498 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
SLC38A6-219ENST00000554498 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
SLC38A6-219ENST00000554498 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
SLC38A6-219ENST00000554498 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
SLC38A6-219ENST00000554498 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
SLC38A6-219ENST00000554498 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
SLC38A6-219ENST00000554498 PTGER2P43116 358 aa12.79□□□□□ -0.36
SLC38A6-219ENST00000554498 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
SLC38A6-219ENST00000554498 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
SLC38A6-219ENST00000554498 SOX12O15370 315 aa12.72□□□□□ -0.37
SLC38A6-219ENST00000554498 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms