RNA–Protein interactions for RNA: ENST00000554186.1

LINC00520-201, long intergenic non-protein coding RNA 520, humanhuman

TSL 5 BASIC

Gene LINC00520, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-201ENST00000554186 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
LINC00520-201ENST00000554186 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
LINC00520-201ENST00000554186 LCE2DQ5TA82 110 aaPredicted RBP13.04□□□□□ -0.32
LINC00520-201ENST00000554186 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
LINC00520-201ENST00000554186 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
LINC00520-201ENST00000554186 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
LINC00520-201ENST00000554186 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
LINC00520-201ENST00000554186 MIER1Q8N108 512 aa12.96□□□□□ -0.33
LINC00520-201ENST00000554186 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
LINC00520-201ENST00000554186 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
LINC00520-201ENST00000554186 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
LINC00520-201ENST00000554186 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
LINC00520-201ENST00000554186 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
LINC00520-201ENST00000554186 MAP3K13O43283 966 aa12.87□□□□□ -0.35
LINC00520-201ENST00000554186 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
LINC00520-201ENST00000554186 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
LINC00520-201ENST00000554186 C7P10643 843 aa12.84□□□□□ -0.35
LINC00520-201ENST00000554186 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
LINC00520-201ENST00000554186 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 FKBP8Q14318 412 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
LINC00520-201ENST00000554186 NUBP1P53384 320 aa12.8□□□□□ -0.36
LINC00520-201ENST00000554186 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
LINC00520-201ENST00000554186 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
LINC00520-201ENST00000554186 TIE1P35590 1138 aa12.72□□□□□ -0.37
LINC00520-201ENST00000554186 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
LINC00520-201ENST00000554186 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
LINC00520-201ENST00000554186 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
LINC00520-201ENST00000554186 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
LINC00520-201ENST00000554186 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
LINC00520-201ENST00000554186 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
LINC00520-201ENST00000554186 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
LINC00520-201ENST00000554186 SEC24BO95487 1268 aa12.56□□□□□ -0.4
LINC00520-201ENST00000554186 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
LINC00520-201ENST00000554186 PYGBP11216 843 aa12.54□□□□□ -0.4
LINC00520-201ENST00000554186 IER5LQ5T953 404 aa12.52□□□□□ -0.41
LINC00520-201ENST00000554186 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
LINC00520-201ENST00000554186 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
LINC00520-201ENST00000554186 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
LINC00520-201ENST00000554186 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
LINC00520-201ENST00000554186 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
LINC00520-201ENST00000554186 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
LINC00520-201ENST00000554186 PLCG2P16885 1265 aa12.4□□□□□ -0.42
LINC00520-201ENST00000554186 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
LINC00520-201ENST00000554186 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
LINC00520-201ENST00000554186 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
LINC00520-201ENST00000554186 ST18O60284 1047 aa12.29□□□□□ -0.44
LINC00520-201ENST00000554186 GSE1Q14687 1217 aa12.29□□□□□ -0.44
LINC00520-201ENST00000554186 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
LINC00520-201ENST00000554186 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
LINC00520-201ENST00000554186 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
LINC00520-201ENST00000554186 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
LINC00520-201ENST00000554186 PSEN1P49768 467 aa12.21□□□□□ -0.45
LINC00520-201ENST00000554186 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
LINC00520-201ENST00000554186 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
LINC00520-201ENST00000554186 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
LINC00520-201ENST00000554186 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
LINC00520-201ENST00000554186 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
LINC00520-201ENST00000554186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC00520-201ENST00000554186 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
LINC00520-201ENST00000554186 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
LINC00520-201ENST00000554186 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
LINC00520-201ENST00000554186 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
LINC00520-201ENST00000554186 C3orf67Q6ZVT6 689 aa12.08□□□□□ -0.48
LINC00520-201ENST00000554186 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
LINC00520-201ENST00000554186 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
LINC00520-201ENST00000554186 SNPHO15079 494 aa12.04□□□□□ -0.48
LINC00520-201ENST00000554186 TMEM121BQ9BXQ6 578 aaPredicted RBP12.04□□□□□ -0.48
LINC00520-201ENST00000554186 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
LINC00520-201ENST00000554186 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
LINC00520-201ENST00000554186 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
LINC00520-201ENST00000554186 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
LINC00520-201ENST00000554186 EMP3P54852 163 aa11.94□□□□□ -0.5
LINC00520-201ENST00000554186 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
LINC00520-201ENST00000554186 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
LINC00520-201ENST00000554186 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
LINC00520-201ENST00000554186 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
LINC00520-201ENST00000554186 G3V3G9 751 aa11.85□□□□□ -0.51
LINC00520-201ENST00000554186 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
LINC00520-201ENST00000554186 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
LINC00520-201ENST00000554186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
LINC00520-201ENST00000554186 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
LINC00520-201ENST00000554186 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
LINC00520-201ENST00000554186 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
LINC00520-201ENST00000554186 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
LINC00520-201ENST00000554186 SOX12O15370 315 aa11.72□□□□□ -0.53
LINC00520-201ENST00000554186 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
LINC00520-201ENST00000554186 ERBB3P21860 1342 aa11.68□□□□□ -0.54
LINC00520-201ENST00000554186 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
LINC00520-201ENST00000554186 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms