RNA–Protein interactions for RNA: ENST00000554072.1

SLC38A6-217, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-217ENST00000554072 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
SLC38A6-217ENST00000554072 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
SLC38A6-217ENST00000554072 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
SLC38A6-217ENST00000554072 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
SLC38A6-217ENST00000554072 SCUBE2Q9NQ36 999 aa13.28□□□□□ -0.28
SLC38A6-217ENST00000554072 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
SLC38A6-217ENST00000554072 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
SLC38A6-217ENST00000554072 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
SLC38A6-217ENST00000554072 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.3
SLC38A6-217ENST00000554072 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC38A6-217ENST00000554072 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
SLC38A6-217ENST00000554072 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
SLC38A6-217ENST00000554072 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
SLC38A6-217ENST00000554072 TRPC6Q9Y210 931 aa13□□□□□ -0.33
SLC38A6-217ENST00000554072 ST18O60284 1047 aa12.98□□□□□ -0.33
SLC38A6-217ENST00000554072 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
SLC38A6-217ENST00000554072 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
SLC38A6-217ENST00000554072 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
SLC38A6-217ENST00000554072 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
SLC38A6-217ENST00000554072 SEC24BO95487 1268 aa12.85□□□□□ -0.35
SLC38A6-217ENST00000554072 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
SLC38A6-217ENST00000554072 TIE1P35590 1138 aa12.83□□□□□ -0.36
SLC38A6-217ENST00000554072 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
SLC38A6-217ENST00000554072 MAP3K13O43283 966 aa12.79□□□□□ -0.36
SLC38A6-217ENST00000554072 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SLC38A6-217ENST00000554072 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
SLC38A6-217ENST00000554072 IER5LQ5T953 404 aa12.7□□□□□ -0.38
SLC38A6-217ENST00000554072 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
SLC38A6-217ENST00000554072 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
SLC38A6-217ENST00000554072 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
SLC38A6-217ENST00000554072 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
SLC38A6-217ENST00000554072 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
SLC38A6-217ENST00000554072 PLCG2P16885 1265 aa12.53□□□□□ -0.4
SLC38A6-217ENST00000554072 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
SLC38A6-217ENST00000554072 SNPHO15079 494 aa12.51□□□□□ -0.41
SLC38A6-217ENST00000554072 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
SLC38A6-217ENST00000554072 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
SLC38A6-217ENST00000554072 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
SLC38A6-217ENST00000554072 EMP3P54852 163 aa12.47□□□□□ -0.41
SLC38A6-217ENST00000554072 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
SLC38A6-217ENST00000554072 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SLC38A6-217ENST00000554072 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
SLC38A6-217ENST00000554072 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
SLC38A6-217ENST00000554072 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
SLC38A6-217ENST00000554072 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
SLC38A6-217ENST00000554072 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
SLC38A6-217ENST00000554072 PROM2Q8N271 834 aa12.33□□□□□ -0.44
SLC38A6-217ENST00000554072 MIER1Q8N108 512 aa12.27□□□□□ -0.45
SLC38A6-217ENST00000554072 PLEKHG5O94827 1062 aa12.24□□□□□ -0.45
SLC38A6-217ENST00000554072 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
SLC38A6-217ENST00000554072 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
SLC38A6-217ENST00000554072 NUBP1P53384 320 aa12.19□□□□□ -0.46
SLC38A6-217ENST00000554072 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
SLC38A6-217ENST00000554072 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
SLC38A6-217ENST00000554072 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
SLC38A6-217ENST00000554072 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
SLC38A6-217ENST00000554072 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
SLC38A6-217ENST00000554072 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
SLC38A6-217ENST00000554072 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
SLC38A6-217ENST00000554072 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
SLC38A6-217ENST00000554072 PYGBP11216 843 aa11.99□□□□□ -0.49
SLC38A6-217ENST00000554072 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
SLC38A6-217ENST00000554072 ERBB3P21860 1342 aa11.99□□□□□ -0.49
SLC38A6-217ENST00000554072 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
SLC38A6-217ENST00000554072 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
SLC38A6-217ENST00000554072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLC38A6-217ENST00000554072 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
SLC38A6-217ENST00000554072 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
SLC38A6-217ENST00000554072 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
SLC38A6-217ENST00000554072 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
SLC38A6-217ENST00000554072 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
SLC38A6-217ENST00000554072 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
SLC38A6-217ENST00000554072 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
SLC38A6-217ENST00000554072 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
SLC38A6-217ENST00000554072 PTGER2P43116 358 aa11.81□□□□□ -0.52
SLC38A6-217ENST00000554072 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
SLC38A6-217ENST00000554072 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
SLC38A6-217ENST00000554072 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
SLC38A6-217ENST00000554072 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
SLC38A6-217ENST00000554072 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
SLC38A6-217ENST00000554072 PSEN1P49768 467 aa11.7□□□□□ -0.54
SLC38A6-217ENST00000554072 G3V3G9 751 aa11.69□□□□□ -0.54
SLC38A6-217ENST00000554072 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
SLC38A6-217ENST00000554072 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
SLC38A6-217ENST00000554072 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
SLC38A6-217ENST00000554072 LSM11P83369 360 aaKnown RBP eCLIP11.62□□□□□ -0.55
SLC38A6-217ENST00000554072 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
SLC38A6-217ENST00000554072 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
SLC38A6-217ENST00000554072 HCSTQ9UBK5 93 aa11.54□□□□□ -0.56
SLC38A6-217ENST00000554072 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
SLC38A6-217ENST00000554072 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
SLC38A6-217ENST00000554072 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
SLC38A6-217ENST00000554072 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
SLC38A6-217ENST00000554072 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
SLC38A6-217ENST00000554072 GSE1Q14687 1217 aa11.48□□□□□ -0.57
SLC38A6-217ENST00000554072 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
SLC38A6-217ENST00000554072 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
SLC38A6-217ENST00000554072 AXIN2Q9Y2T1 843 aa11.42□□□□□ -0.58
SLC38A6-217ENST00000554072 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
SLC38A6-217ENST00000554072 PBX2P40425 430 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms