RNA–Protein interactions for RNA: ENST00000553876.2

RBM23-208, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 267 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-208	ENST00000553876	SPOCK2	Q92563	424 aa		12.17	□□□□□ -0.46
RBM23-208	ENST00000553876	FAM212A	Q96EL1	285 aa		12.15	□□□□□ -0.46
RBM23-208	ENST00000553876	GABBR2	O75899	941 aa		12.13	□□□□□ -0.47
RBM23-208	ENST00000553876	GALR2	O43603	387 aa	Predicted RBP	12.07	□□□□□ -0.48
RBM23-208	ENST00000553876	DCAF8	Q5TAQ9	597 aa		12.06	□□□□□ -0.48
RBM23-208	ENST00000553876	KIF12	Q96FN5	646 aa		12.06	□□□□□ -0.48
RBM23-208	ENST00000553876	MS4A3	Q96HJ5	214 aa		12.04	□□□□□ -0.48
RBM23-208	ENST00000553876	MAP3K13	O43283	966 aa		12.03	□□□□□ -0.48
RBM23-208	ENST00000553876	GSE1	Q14687	1217 aa		12.02	□□□□□ -0.49
RBM23-208	ENST00000553876	PYGB	P11216	843 aa		12.01	□□□□□ -0.49
RBM23-208	ENST00000553876	CIZ1	Q9ULV3	898 aa	Predicted RBP	12	□□□□□ -0.49
RBM23-208	ENST00000553876	CLCN6	P51797	869 aa		11.98	□□□□□ -0.49
RBM23-208	ENST00000553876	TRPC6	Q9Y210	931 aa		11.97	□□□□□ -0.49
RBM23-208	ENST00000553876	POTEI	P0CG38	1075 aa		11.95	□□□□□ -0.5
RBM23-208	ENST00000553876	IFNL1	Q8IU54	200 aa		11.94	□□□□□ -0.5
RBM23-208	ENST00000553876	PCDHB13	Q9Y5F0	798 aa		11.94	□□□□□ -0.5
RBM23-208	ENST00000553876	CHRM1	P11229	460 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM23-208	ENST00000553876	PKD2	Q13563	968 aa		11.9	□□□□□ -0.5
RBM23-208	ENST00000553876	SGIP1	Q9BQI5	828 aa		11.9	□□□□□ -0.5
RBM23-208	ENST00000553876	PCDHB8	Q9UN66	801 aa		11.88	□□□□□ -0.51
RBM23-208	ENST00000553876	RNF25	Q96BH1	459 aa	Predicted RBP	11.87	□□□□□ -0.51
RBM23-208	ENST00000553876	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.85	□□□□□ -0.51
RBM23-208	ENST00000553876	TRIM41	Q8WV44	630 aa		11.84	□□□□□ -0.51
RBM23-208	ENST00000553876	DCBLD2	Q96PD2	775 aa		11.84	□□□□□ -0.51
RBM23-208	ENST00000553876	ATMIN	O43313	823 aa	Predicted RBP	11.82	□□□□□ -0.52
RBM23-208	ENST00000553876	ASTL	Q6HA08	431 aa	Predicted RBP	11.82	□□□□□ -0.52
RBM23-208	ENST00000553876	PELP1	Q8IZL8	1130 aa	Known RBP	11.81	□□□□□ -0.52
RBM23-208	ENST00000553876	TTLL13P	A6NNM8	815 aa		11.8	□□□□□ -0.52
RBM23-208	ENST00000553876	TIE1	P35590	1138 aa		11.8	□□□□□ -0.52
RBM23-208	ENST00000553876	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.8	□□□□□ -0.52
RBM23-208	ENST00000553876	ECM2	O94769	699 aa	Predicted RBP	11.78	□□□□□ -0.52
RBM23-208	ENST00000553876	ATN1	P54259	1190 aa	Predicted RBP	11.78	□□□□□ -0.52
RBM23-208	ENST00000553876	TMEM106C	Q9BVX2	250 aa		11.75	□□□□□ -0.53
RBM23-208	ENST00000553876	RGL2	O15211	777 aa		11.74	□□□□□ -0.53
RBM23-208	ENST00000553876	RIOK3	O14730	519 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-208	ENST00000553876	PSEN1	P49768	467 aa		11.71	□□□□□ -0.53
RBM23-208	ENST00000553876	PDAP1	Q13442	181 aa	Known RBP	11.71	□□□□□ -0.53
RBM23-208	ENST00000553876	TRIM35	Q9UPQ4	493 aa		11.7	□□□□□ -0.54
RBM23-208	ENST00000553876	RTN4	Q9NQC3	1192 aa	Known RBP	11.66	□□□□□ -0.54
RBM23-208	ENST00000553876	METRN	Q9UJH8	293 aa		11.65	□□□□□ -0.54
RBM23-208	ENST00000553876	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.64	□□□□□ -0.55
RBM23-208	ENST00000553876	VGF	O15240	615 aa	Predicted RBP	11.64	□□□□□ -0.55
RBM23-208	ENST00000553876	ZFP91	Q96JP5	570 aa	Predicted RBP	11.64	□□□□□ -0.55
RBM23-208	ENST00000553876	POTEF	A5A3E0	1075 aa		11.63	□□□□□ -0.55
RBM23-208	ENST00000553876	SLC39A7	Q92504	469 aa		11.62	□□□□□ -0.55
RBM23-208	ENST00000553876	C7	P10643	843 aa		11.59	□□□□□ -0.55
RBM23-208	ENST00000553876	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.59	□□□□□ -0.55
RBM23-208	ENST00000553876	COLQ	Q9Y215	455 aa	Predicted RBP	11.59	□□□□□ -0.55
RBM23-208	ENST00000553876	POTEB2	H3BUK9	544 aa		11.58	□□□□□ -0.56
RBM23-208	ENST00000553876	CABP2	Q9NPB3	220 aa		11.58	□□□□□ -0.56
RBM23-208	ENST00000553876	IER5L	Q5T953	404 aa		11.57	□□□□□ -0.56
RBM23-208	ENST00000553876	IRX5	P78411	483 aa	Predicted RBP	11.55	□□□□□ -0.56
RBM23-208	ENST00000553876	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.55	□□□□□ -0.56
RBM23-208	ENST00000553876	STK25	O00506	426 aa		11.52	□□□□□ -0.57
RBM23-208	ENST00000553876	POTEJ	P0CG39	1038 aa		11.52	□□□□□ -0.57
RBM23-208	ENST00000553876	EFCAB3	Q8N7B9	438 aa		11.51	□□□□□ -0.57
RBM23-208	ENST00000553876	GOLGA2	Q08379	1002 aa		11.5	□□□□□ -0.57
RBM23-208	ENST00000553876	LHX8	Q68G74	356 aa		11.5	□□□□□ -0.57
RBM23-208	ENST00000553876	PDCD7	Q8N8D1	485 aa	Known RBP	11.5	□□□□□ -0.57
RBM23-208	ENST00000553876	STK24	Q9Y6E0	443 aa		11.5	□□□□□ -0.57
RBM23-208	ENST00000553876	ILDR1	Q86SU0	546 aa	Predicted RBP	11.49	□□□□□ -0.57
RBM23-208	ENST00000553876	TAOK2	Q9UL54	1235 aa		11.49	□□□□□ -0.57
RBM23-208	ENST00000553876	MKRN3	Q13064	507 aa	Known RBP	11.48	□□□□□ -0.57
RBM23-208	ENST00000553876	SEC24B	O95487	1268 aa		11.47	□□□□□ -0.57
RBM23-208	ENST00000553876	HS6ST3	Q8IZP7	471 aa		11.47	□□□□□ -0.57
RBM23-208	ENST00000553876	PLCG2	P16885	1265 aa		11.46	□□□□□ -0.57
RBM23-208	ENST00000553876	OCEL1	Q9H607	264 aa		11.45	□□□□□ -0.58
RBM23-208	ENST00000553876	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
RBM23-208	ENST00000553876	CHGA	P10645	457 aa	Known RBP	11.43	□□□□□ -0.58
RBM23-208	ENST00000553876	MS4A4A	Q96JQ5	239 aa		11.41	□□□□□ -0.58
RBM23-208	ENST00000553876	PHF8	Q9UPP1	1060 aa		11.41	□□□□□ -0.58
RBM23-208	ENST00000553876	DPY19L2	Q6NUT2	758 aa		11.4	□□□□□ -0.58
RBM23-208	ENST00000553876	MFRP	Q9BY79	579 aa		11.4	□□□□□ -0.58
RBM23-208	ENST00000553876	DCAF8L2	P0C7V8	631 aa		11.39	□□□□□ -0.59
RBM23-208	ENST00000553876	FBXO22	Q8NEZ5	403 aa		11.39	□□□□□ -0.59
RBM23-208	ENST00000553876	OTUD5	Q96G74	571 aa		11.39	□□□□□ -0.59
RBM23-208	ENST00000553876	SOX12	O15370	315 aa		11.37	□□□□□ -0.59
RBM23-208	ENST00000553876	NKX1-1	Q15270	411 aa	Predicted RBP	11.37	□□□□□ -0.59
RBM23-208	ENST00000553876	DNAJC5	Q9H3Z4	198 aa		11.34	□□□□□ -0.59
RBM23-208	ENST00000553876	NLRP6	P59044	892 aa		11.31	□□□□□ -0.6
RBM23-208	ENST00000553876	MAMSTR	Q6ZN01	415 aa		11.26	□□□□□ -0.61
RBM23-208	ENST00000553876	SCUBE2	Q9NQ36	999 aa		11.26	□□□□□ -0.61
RBM23-208	ENST00000553876	BOLA1	Q9Y3E2	137 aa		11.26	□□□□□ -0.61
RBM23-208	ENST00000553876	MICALL2	Q8IY33	904 aa		11.25	□□□□□ -0.61
RBM23-208	ENST00000553876	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.25	□□□□□ -0.61
RBM23-208	ENST00000553876	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.25	□□□□□ -0.61
RBM23-208	ENST00000553876	PPP1R37	O75864	691 aa		11.24	□□□□□ -0.61
RBM23-208	ENST00000553876	GTPBP6	O43824	516 aa	Predicted RBP	11.19	□□□□□ -0.62
RBM23-208	ENST00000553876	C3orf67	Q6ZVT6	689 aa		11.19	□□□□□ -0.62
RBM23-208	ENST00000553876	TMEM92	Q6UXU6	159 aa		11.17	□□□□□ -0.62
RBM23-208	ENST00000553876	SLAIN1	Q8ND83	568 aa		11.17	□□□□□ -0.62
RBM23-208	ENST00000553876	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.17	□□□□□ -0.62
RBM23-208	ENST00000553876		G3V3G9	751 aa		11.14	□□□□□ -0.63
RBM23-208	ENST00000553876	BBX	Q8WY36	941 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM23-208	ENST00000553876	RYDEN	Q9NUL5	291 aa	Known RBP	11.09	□□□□□ -0.63
RBM23-208	ENST00000553876	LCE2D	Q5TA82	110 aa	Predicted RBP	11.06	□□□□□ -0.64
RBM23-208	ENST00000553876	KIF3C	O14782	793 aa		11.05	□□□□□ -0.64
RBM23-208	ENST00000553876	C2orf72	A6NCS6	295 aa		11.01	□□□□□ -0.65
RBM23-208	ENST00000553876	HOXB3	P14651	431 aa	Predicted RBP	11	□□□□□ -0.65
RBM23-208	ENST00000553876	CADPS2	Q86UW7	1296 aa		11	□□□□□ -0.65

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