RNA–Protein interactions for RNA: ENST00000553734.5

RAD51B-217, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-217ENST00000553734 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
RAD51B-217ENST00000553734 HAX1O00165 279 aa9.02□□□□□ -0.97
RAD51B-217ENST00000553734 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
RAD51B-217ENST00000553734 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
RAD51B-217ENST00000553734 SPRYD3Q8NCJ5 442 aa9.02□□□□□ -0.97
RAD51B-217ENST00000553734 MNX1P50219 401 aaPredicted RBP9.01□□□□□ -0.97
RAD51B-217ENST00000553734 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
RAD51B-217ENST00000553734 DNAJC5Q9H3Z4 198 aa9.01□□□□□ -0.97
RAD51B-217ENST00000553734 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
RAD51B-217ENST00000553734 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
RAD51B-217ENST00000553734 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
RAD51B-217ENST00000553734 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
RAD51B-217ENST00000553734 EVX2Q03828 476 aa8.95□□□□□ -0.98
RAD51B-217ENST00000553734 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
RAD51B-217ENST00000553734 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
RAD51B-217ENST00000553734 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
RAD51B-217ENST00000553734 TPRNQ4KMQ1 711 aa8.9□□□□□ -0.98
RAD51B-217ENST00000553734 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
RAD51B-217ENST00000553734 GSE1Q14687 1217 aa8.86□□□□□ -0.99
RAD51B-217ENST00000553734 RASEFQ8IZ41 740 aa8.86□□□□□ -0.99
RAD51B-217ENST00000553734 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
RAD51B-217ENST00000553734 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
RAD51B-217ENST00000553734 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
RAD51B-217ENST00000553734 NUBP1P53384 320 aa8.85□□□□□ -0.99
RAD51B-217ENST00000553734 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
RAD51B-217ENST00000553734 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
RAD51B-217ENST00000553734 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
RAD51B-217ENST00000553734 CHRM1P11229 460 aaPredicted RBP8.78□□□□□ -1
RAD51B-217ENST00000553734 DCAF8Q5TAQ9 597 aa8.78□□□□□ -1
RAD51B-217ENST00000553734 ZNF579Q8NAF0 562 aaKnown RBP8.78□□□□□ -1
RAD51B-217ENST00000553734 FAM212AQ96EL1 285 aa8.78□□□□□ -1
RAD51B-217ENST00000553734 PHF12Q96QT6 1004 aa8.78□□□□□ -1
RAD51B-217ENST00000553734 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
RAD51B-217ENST00000553734 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
RAD51B-217ENST00000553734 CCDC61Q9Y6R9 512 aa8.77□□□□□ -1.01
RAD51B-217ENST00000553734 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
RAD51B-217ENST00000553734 GABBR2O75899 941 aa8.75□□□□□ -1.01
RAD51B-217ENST00000553734 NBR1Q14596 966 aa8.74□□□□□ -1.01
RAD51B-217ENST00000553734 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
RAD51B-217ENST00000553734 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
RAD51B-217ENST00000553734 PYGBP11216 843 aa8.69□□□□□ -1.02
RAD51B-217ENST00000553734 MAP3K13O43283 966 aa8.68□□□□□ -1.02
RAD51B-217ENST00000553734 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
RAD51B-217ENST00000553734 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
RAD51B-217ENST00000553734 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
RAD51B-217ENST00000553734 STK25O00506 426 aa8.65□□□□□ -1.02
RAD51B-217ENST00000553734 CLCN6P51797 869 aa8.65□□□□□ -1.02
RAD51B-217ENST00000553734 PCDHB13Q9Y5F0 798 aa8.64□□□□□ -1.03
RAD51B-217ENST00000553734 TRPC6Q9Y210 931 aa8.6□□□□□ -1.03
RAD51B-217ENST00000553734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
RAD51B-217ENST00000553734 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
RAD51B-217ENST00000553734 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
RAD51B-217ENST00000553734 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
RAD51B-217ENST00000553734 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
RAD51B-217ENST00000553734 POTEIP0CG38 1075 aa8.57□□□□□ -1.04
RAD51B-217ENST00000553734 PCDHB8Q9UN66 801 aa8.57□□□□□ -1.04
RAD51B-217ENST00000553734 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
RAD51B-217ENST00000553734 P3H3Q8IVL6 736 aa8.55□□□□□ -1.04
RAD51B-217ENST00000553734 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
RAD51B-217ENST00000553734 BMP2KQ9NSY1 1161 aaPredicted RBP8.52□□□□□ -1.05
RAD51B-217ENST00000553734 TIE1P35590 1138 aa8.51□□□□□ -1.05
RAD51B-217ENST00000553734 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
RAD51B-217ENST00000553734 ATN1P54259 1190 aaPredicted RBP8.5□□□□□ -1.05
RAD51B-217ENST00000553734 ASTLQ6HA08 431 aaPredicted RBP8.5□□□□□ -1.05
RAD51B-217ENST00000553734 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
RAD51B-217ENST00000553734 TTLL13PA6NNM8 815 aa8.48□□□□□ -1.05
RAD51B-217ENST00000553734 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
RAD51B-217ENST00000553734 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
RAD51B-217ENST00000553734 TMEM106CQ9BVX2 250 aa8.48□□□□□ -1.05
RAD51B-217ENST00000553734 PSEN1P49768 467 aa8.46□□□□□ -1.06
RAD51B-217ENST00000553734 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
RAD51B-217ENST00000553734 PDAP1Q13442 181 aaKnown RBP8.45□□□□□ -1.06
RAD51B-217ENST00000553734 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
RAD51B-217ENST00000553734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.44□□□□□ -1.06
RAD51B-217ENST00000553734 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
RAD51B-217ENST00000553734 KCNV2Q8TDN2 545 aa8.44□□□□□ -1.06
RAD51B-217ENST00000553734 TRIM35Q9UPQ4 493 aa8.44□□□□□ -1.06
RAD51B-217ENST00000553734 TULP1O00294 542 aaPredicted RBP8.4□□□□□ -1.06
RAD51B-217ENST00000553734 SLC39A7Q92504 469 aa8.4□□□□□ -1.06
RAD51B-217ENST00000553734 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
RAD51B-217ENST00000553734 MFRPQ9BY79 579 aa8.39□□□□□ -1.07
RAD51B-217ENST00000553734 METRNQ9UJH8 293 aa8.39□□□□□ -1.07
RAD51B-217ENST00000553734 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
RAD51B-217ENST00000553734 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
RAD51B-217ENST00000553734 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
RAD51B-217ENST00000553734 C7P10643 843 aa8.37□□□□□ -1.07
RAD51B-217ENST00000553734 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
RAD51B-217ENST00000553734 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
RAD51B-217ENST00000553734 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.07
RAD51B-217ENST00000553734 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
RAD51B-217ENST00000553734 SEC24BO95487 1268 aa8.33□□□□□ -1.08
RAD51B-217ENST00000553734 IER5LQ5T953 404 aa8.33□□□□□ -1.08
RAD51B-217ENST00000553734 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
RAD51B-217ENST00000553734 POTEB2H3BUK9 544 aa8.31□□□□□ -1.08
RAD51B-217ENST00000553734 SOX12O15370 315 aa8.31□□□□□ -1.08
RAD51B-217ENST00000553734 LHX8Q68G74 356 aa8.31□□□□□ -1.08
RAD51B-217ENST00000553734 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
RAD51B-217ENST00000553734 IRX5P78411 483 aaPredicted RBP8.3□□□□□ -1.08
RAD51B-217ENST00000553734 TESPA1A2RU30 521 aaPredicted RBP8.29□□□□□ -1.08
RAD51B-217ENST00000553734 PPP1R37O75864 691 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms