RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
FCF1-204ENST00000553673 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
FCF1-204ENST00000553673 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
FCF1-204ENST00000553673 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
FCF1-204ENST00000553673 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
FCF1-204ENST00000553673 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
FCF1-204ENST00000553673 METRNQ9UJH8 293 aa13.76□□□□□ -0.21
FCF1-204ENST00000553673 FKBP8Q14318 412 aa13.73□□□□□ -0.21
FCF1-204ENST00000553673 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
FCF1-204ENST00000553673 C7P10643 843 aa13.71□□□□□ -0.21
FCF1-204ENST00000553673 MAP3K13O43283 966 aa13.7□□□□□ -0.22
FCF1-204ENST00000553673 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
FCF1-204ENST00000553673 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
FCF1-204ENST00000553673 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
FCF1-204ENST00000553673 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
FCF1-204ENST00000553673 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
FCF1-204ENST00000553673 NUBP1P53384 320 aa13.61□□□□□ -0.23
FCF1-204ENST00000553673 TIE1P35590 1138 aa13.59□□□□□ -0.23
FCF1-204ENST00000553673 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
FCF1-204ENST00000553673 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
FCF1-204ENST00000553673 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
FCF1-204ENST00000553673 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
FCF1-204ENST00000553673 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
FCF1-204ENST00000553673 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
FCF1-204ENST00000553673 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
FCF1-204ENST00000553673 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
FCF1-204ENST00000553673 POTEMA6NI47 508 aa13.46□□□□□ -0.25
FCF1-204ENST00000553673 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
FCF1-204ENST00000553673 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
FCF1-204ENST00000553673 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
FCF1-204ENST00000553673 SEC24BO95487 1268 aa13.44□□□□□ -0.26
FCF1-204ENST00000553673 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
FCF1-204ENST00000553673 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
FCF1-204ENST00000553673 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
FCF1-204ENST00000553673 IER5LQ5T953 404 aa13.39□□□□□ -0.27
FCF1-204ENST00000553673 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
FCF1-204ENST00000553673 PYGBP11216 843 aa13.36□□□□□ -0.27
FCF1-204ENST00000553673 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
FCF1-204ENST00000553673 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
FCF1-204ENST00000553673 LCE2DQ5TA82 110 aaPredicted RBP13.32□□□□□ -0.28
FCF1-204ENST00000553673 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
FCF1-204ENST00000553673 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
FCF1-204ENST00000553673 PLCG2P16885 1265 aa13.26□□□□□ -0.29
FCF1-204ENST00000553673 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
FCF1-204ENST00000553673 GSE1Q14687 1217 aa13.21□□□□□ -0.29
FCF1-204ENST00000553673 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
FCF1-204ENST00000553673 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
FCF1-204ENST00000553673 OCEL1Q9H607 264 aa13.16□□□□□ -0.3
FCF1-204ENST00000553673 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
FCF1-204ENST00000553673 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
FCF1-204ENST00000553673 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
FCF1-204ENST00000553673 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
FCF1-204ENST00000553673 ST18O60284 1047 aa13.05□□□□□ -0.32
FCF1-204ENST00000553673 PSEN1P49768 467 aa13.04□□□□□ -0.32
FCF1-204ENST00000553673 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
FCF1-204ENST00000553673 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
FCF1-204ENST00000553673 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
FCF1-204ENST00000553673 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
FCF1-204ENST00000553673 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
FCF1-204ENST00000553673 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
FCF1-204ENST00000553673 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
FCF1-204ENST00000553673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
FCF1-204ENST00000553673 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
FCF1-204ENST00000553673 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
FCF1-204ENST00000553673 SNPHO15079 494 aa12.93□□□□□ -0.34
FCF1-204ENST00000553673 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
FCF1-204ENST00000553673 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
FCF1-204ENST00000553673 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
FCF1-204ENST00000553673 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
FCF1-204ENST00000553673 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
FCF1-204ENST00000553673 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
FCF1-204ENST00000553673 G3V3G9 751 aa12.77□□□□□ -0.37
FCF1-204ENST00000553673 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
FCF1-204ENST00000553673 EMP3P54852 163 aa12.74□□□□□ -0.37
FCF1-204ENST00000553673 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
FCF1-204ENST00000553673 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
FCF1-204ENST00000553673 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
FCF1-204ENST00000553673 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
FCF1-204ENST00000553673 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
FCF1-204ENST00000553673 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
FCF1-204ENST00000553673 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
FCF1-204ENST00000553673 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
FCF1-204ENST00000553673 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
FCF1-204ENST00000553673 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
FCF1-204ENST00000553673 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
FCF1-204ENST00000553673 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
FCF1-204ENST00000553673 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
FCF1-204ENST00000553673 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
FCF1-204ENST00000553673 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
FCF1-204ENST00000553673 SOX12O15370 315 aa12.57□□□□□ -0.4
FCF1-204ENST00000553673 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
FCF1-204ENST00000553673 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
FCF1-204ENST00000553673 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
FCF1-204ENST00000553673 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
FCF1-204ENST00000553673 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
FCF1-204ENST00000553673 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
FCF1-204ENST00000553673 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
FCF1-204ENST00000553673 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
FCF1-204ENST00000553673 ERBB3P21860 1342 aa12.48□□□□□ -0.41
FCF1-204ENST00000553673 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms