RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CHADLQ6NUI6 762 aa8.69□□□□□ -1.02
TDP1-207ENST00000553617 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
TDP1-207ENST00000553617 PRR29P0C7W0 189 aa8.68□□□□□ -1.02
TDP1-207ENST00000553617 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
TDP1-207ENST00000553617 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
TDP1-207ENST00000553617 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
TDP1-207ENST00000553617 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
TDP1-207ENST00000553617 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
TDP1-207ENST00000553617 CIZ1Q9ULV3 898 aaPredicted RBP8.65□□□□□ -1.02
TDP1-207ENST00000553617 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
TDP1-207ENST00000553617 GABBR2O75899 941 aa8.62□□□□□ -1.03
TDP1-207ENST00000553617 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
TDP1-207ENST00000553617 TSHZ2Q9NRE2 1034 aa8.61□□□□□ -1.03
TDP1-207ENST00000553617 DNAJC5Q9H3Z4 198 aa8.6□□□□□ -1.03
TDP1-207ENST00000553617 HS6ST3Q8IZP7 471 aa8.59□□□□□ -1.03
TDP1-207ENST00000553617 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
TDP1-207ENST00000553617 NUBP1P53384 320 aa8.57□□□□□ -1.04
TDP1-207ENST00000553617 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
TDP1-207ENST00000553617 GSE1Q14687 1217 aa8.55□□□□□ -1.04
TDP1-207ENST00000553617 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
TDP1-207ENST00000553617 TPRNQ4KMQ1 711 aa8.51□□□□□ -1.05
TDP1-207ENST00000553617 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
TDP1-207ENST00000553617 NKX1-1Q15270 411 aaPredicted RBP8.49□□□□□ -1.05
TDP1-207ENST00000553617 RIOK3O14730 519 aaKnown RBP8.48□□□□□ -1.05
TDP1-207ENST00000553617 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
TDP1-207ENST00000553617 LHX8Q68G74 356 aa8.46□□□□□ -1.06
TDP1-207ENST00000553617 POTEIP0CG38 1075 aa8.45□□□□□ -1.06
TDP1-207ENST00000553617 CLCN6P51797 869 aa8.45□□□□□ -1.06
TDP1-207ENST00000553617 DCAF8Q5TAQ9 597 aa8.45□□□□□ -1.06
TDP1-207ENST00000553617 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
TDP1-207ENST00000553617 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
TDP1-207ENST00000553617 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
TDP1-207ENST00000553617 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
TDP1-207ENST00000553617 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
TDP1-207ENST00000553617 SGIP1Q9BQI5 828 aa8.42□□□□□ -1.06
TDP1-207ENST00000553617 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
TDP1-207ENST00000553617 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
TDP1-207ENST00000553617 STK25O00506 426 aa8.38□□□□□ -1.07
TDP1-207ENST00000553617 NBR1Q14596 966 aa8.38□□□□□ -1.07
TDP1-207ENST00000553617 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
TDP1-207ENST00000553617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.34□□□□□ -1.07
TDP1-207ENST00000553617 ZFP91Q96JP5 570 aaPredicted RBP8.34□□□□□ -1.07
TDP1-207ENST00000553617 BCL11BQ9C0K0 894 aaPredicted RBP8.33□□□□□ -1.08
TDP1-207ENST00000553617 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
TDP1-207ENST00000553617 GALR2O43603 387 aaPredicted RBP8.3□□□□□ -1.08
TDP1-207ENST00000553617 PYGBP11216 843 aa8.3□□□□□ -1.08
TDP1-207ENST00000553617 RYDENQ9NUL5 291 aaKnown RBP8.3□□□□□ -1.08
TDP1-207ENST00000553617 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
TDP1-207ENST00000553617 PHF12Q96QT6 1004 aa8.27□□□□□ -1.09
TDP1-207ENST00000553617 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
TDP1-207ENST00000553617 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
TDP1-207ENST00000553617 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
TDP1-207ENST00000553617 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
TDP1-207ENST00000553617 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
TDP1-207ENST00000553617 PELP1Q8IZL8 1130 aaKnown RBP8.17□□□□□ -1.1
TDP1-207ENST00000553617 POTEB2H3BUK9 544 aa8.16□□□□□ -1.1
TDP1-207ENST00000553617 OTUD5Q96G74 571 aa8.16□□□□□ -1.1
TDP1-207ENST00000553617 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
TDP1-207ENST00000553617 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.1
TDP1-207ENST00000553617 PCDHB13Q9Y5F0 798 aa8.15□□□□□ -1.1
TDP1-207ENST00000553617 CCDC61Q9Y6R9 512 aa8.15□□□□□ -1.1
TDP1-207ENST00000553617 ASTLQ6HA08 431 aaPredicted RBP8.14□□□□□ -1.11
TDP1-207ENST00000553617 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
TDP1-207ENST00000553617 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
TDP1-207ENST00000553617 ATMINO43313 823 aaPredicted RBP8.12□□□□□ -1.11
TDP1-207ENST00000553617 PSEN1P49768 467 aa8.11□□□□□ -1.11
TDP1-207ENST00000553617 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
TDP1-207ENST00000553617 WDR70Q9NW82 654 aa8.09□□□□□ -1.11
TDP1-207ENST00000553617 METRNQ9UJH8 293 aa8.09□□□□□ -1.11
TDP1-207ENST00000553617 C7P10643 843 aa8.08□□□□□ -1.12
TDP1-207ENST00000553617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
TDP1-207ENST00000553617 KIF12Q96FN5 646 aa8.08□□□□□ -1.12
TDP1-207ENST00000553617 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
TDP1-207ENST00000553617 LMOD2Q6P5Q4 547 aa8.06□□□□□ -1.12
TDP1-207ENST00000553617 IFNL1Q8IU54 200 aa8.06□□□□□ -1.12
TDP1-207ENST00000553617 MAP3K13O43283 966 aa8.05□□□□□ -1.12
TDP1-207ENST00000553617 PPP1R37O75864 691 aa8.05□□□□□ -1.12
TDP1-207ENST00000553617 POTEJP0CG39 1038 aa8.04□□□□□ -1.12
TDP1-207ENST00000553617 TMEM132AQ24JP5 1023 aa8.04□□□□□ -1.12
TDP1-207ENST00000553617 ATN1P54259 1190 aaPredicted RBP8.03□□□□□ -1.12
TDP1-207ENST00000553617 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
TDP1-207ENST00000553617 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
TDP1-207ENST00000553617 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
TDP1-207ENST00000553617 GTF3C3Q9Y5Q9 886 aa8.02□□□□□ -1.13
TDP1-207ENST00000553617 SOX12O15370 315 aa8.01□□□□□ -1.13
TDP1-207ENST00000553617 NLRP6P59044 892 aa8.01□□□□□ -1.13
TDP1-207ENST00000553617 BMP2KQ9NSY1 1161 aaPredicted RBP8.01□□□□□ -1.13
TDP1-207ENST00000553617 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
TDP1-207ENST00000553617 PHF8Q9UPP1 1060 aa8□□□□□ -1.13
TDP1-207ENST00000553617 TULP1O00294 542 aaPredicted RBP7.99□□□□□ -1.13
TDP1-207ENST00000553617 TIE1P35590 1138 aa7.99□□□□□ -1.13
TDP1-207ENST00000553617 E2F4Q16254 413 aa7.99□□□□□ -1.13
TDP1-207ENST00000553617 MAMSTRQ6ZN01 415 aa7.99□□□□□ -1.13
TDP1-207ENST00000553617 CABP2Q9NPB3 220 aa7.99□□□□□ -1.13
TDP1-207ENST00000553617 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
TDP1-207ENST00000553617 POTEFA5A3E0 1075 aa7.97□□□□□ -1.13
TDP1-207ENST00000553617 NCKAP5LQ9HCH0 1330 aa7.97□□□□□ -1.13
TDP1-207ENST00000553617 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.14
TDP1-207ENST00000553617 POTEMA6NI47 508 aa7.96□□□□□ -1.14
TDP1-207ENST00000553617 POTEGQ6S5H5 508 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms