RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
PRKCH-204ENST00000553265 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
PRKCH-204ENST00000553265 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
PRKCH-204ENST00000553265 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
PRKCH-204ENST00000553265 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKCH-204ENST00000553265 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
PRKCH-204ENST00000553265 PYGBP11216 843 aa13.57□□□□□ -0.24
PRKCH-204ENST00000553265 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-204ENST00000553265 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-204ENST00000553265 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-204ENST00000553265 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
PRKCH-204ENST00000553265 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
PRKCH-204ENST00000553265 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-204ENST00000553265 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
PRKCH-204ENST00000553265 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
PRKCH-204ENST00000553265 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-204ENST00000553265 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
PRKCH-204ENST00000553265 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
PRKCH-204ENST00000553265 STK25O00506 426 aa13.41□□□□□ -0.26
PRKCH-204ENST00000553265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
PRKCH-204ENST00000553265 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
PRKCH-204ENST00000553265 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
PRKCH-204ENST00000553265 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
PRKCH-204ENST00000553265 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
PRKCH-204ENST00000553265 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
PRKCH-204ENST00000553265 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
PRKCH-204ENST00000553265 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
PRKCH-204ENST00000553265 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
PRKCH-204ENST00000553265 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
PRKCH-204ENST00000553265 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
PRKCH-204ENST00000553265 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
PRKCH-204ENST00000553265 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
PRKCH-204ENST00000553265 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
PRKCH-204ENST00000553265 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
PRKCH-204ENST00000553265 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
PRKCH-204ENST00000553265 TSHZ2Q9NRE2 1034 aa13.27□□□□□ -0.29
PRKCH-204ENST00000553265 MAP3K13O43283 966 aa13.25□□□□□ -0.29
PRKCH-204ENST00000553265 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
PRKCH-204ENST00000553265 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
PRKCH-204ENST00000553265 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
PRKCH-204ENST00000553265 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
PRKCH-204ENST00000553265 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
PRKCH-204ENST00000553265 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
PRKCH-204ENST00000553265 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
PRKCH-204ENST00000553265 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
PRKCH-204ENST00000553265 PSEN1P49768 467 aa13.2□□□□□ -0.3
PRKCH-204ENST00000553265 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
PRKCH-204ENST00000553265 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
PRKCH-204ENST00000553265 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
PRKCH-204ENST00000553265 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
PRKCH-204ENST00000553265 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
PRKCH-204ENST00000553265 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
PRKCH-204ENST00000553265 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
PRKCH-204ENST00000553265 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
PRKCH-204ENST00000553265 HAX1O00165 279 aa13□□□□□ -0.33
PRKCH-204ENST00000553265 EVX2Q03828 476 aa12.98□□□□□ -0.33
PRKCH-204ENST00000553265 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
PRKCH-204ENST00000553265 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
PRKCH-204ENST00000553265 BCANQ96GW7 911 aa12.94□□□□□ -0.34
PRKCH-204ENST00000553265 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-204ENST00000553265 PPP1R37O75864 691 aa12.92□□□□□ -0.34
PRKCH-204ENST00000553265 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
PRKCH-204ENST00000553265 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
PRKCH-204ENST00000553265 SOX12O15370 315 aa12.9□□□□□ -0.34
PRKCH-204ENST00000553265 NLRP6P59044 892 aa12.9□□□□□ -0.34
PRKCH-204ENST00000553265 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
PRKCH-204ENST00000553265 NACADO15069 1562 aa12.89□□□□□ -0.35
PRKCH-204ENST00000553265 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
PRKCH-204ENST00000553265 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-204ENST00000553265 TIE1P35590 1138 aa12.86□□□□□ -0.35
PRKCH-204ENST00000553265 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
PRKCH-204ENST00000553265 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
PRKCH-204ENST00000553265 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
PRKCH-204ENST00000553265 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PRKCH-204ENST00000553265 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
PRKCH-204ENST00000553265 NBR1Q14596 966 aa12.74□□□□□ -0.37
PRKCH-204ENST00000553265 POTEHQ6S545 545 aa12.74□□□□□ -0.37
PRKCH-204ENST00000553265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRKCH-204ENST00000553265 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
PRKCH-204ENST00000553265 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.38
PRKCH-204ENST00000553265 CLCN6P51797 869 aa12.7□□□□□ -0.38
PRKCH-204ENST00000553265 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
PRKCH-204ENST00000553265 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
PRKCH-204ENST00000553265 GABBR2O75899 941 aa12.69□□□□□ -0.38
PRKCH-204ENST00000553265 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
PRKCH-204ENST00000553265 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PRKCH-204ENST00000553265 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
PRKCH-204ENST00000553265 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
PRKCH-204ENST00000553265 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-204ENST00000553265 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-204ENST00000553265 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
PRKCH-204ENST00000553265 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
PRKCH-204ENST00000553265 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
PRKCH-204ENST00000553265 LARP6Q9BRS8 491 aaKnown RBP12.61□□□□□ -0.39
PRKCH-204ENST00000553265 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-204ENST00000553265 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
PRKCH-204ENST00000553265 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
PRKCH-204ENST00000553265 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
PRKCH-204ENST00000553265 PDE4AP27815 886 aa12.56□□□□□ -0.4
PRKCH-204ENST00000553265 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms