RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
RFX4-211ENST00000552866 GSE1Q14687 1217 aa11.77□□□□□ -0.53
RFX4-211ENST00000552866 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
RFX4-211ENST00000552866 ARXQ96QS3 562 aa11.76□□□□□ -0.53
RFX4-211ENST00000552866 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
RFX4-211ENST00000552866 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
RFX4-211ENST00000552866 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
RFX4-211ENST00000552866 DSG3P32926 999 aa11.7□□□□□ -0.54
RFX4-211ENST00000552866 NUBP1P53384 320 aa11.64□□□□□ -0.55
RFX4-211ENST00000552866 STK25O00506 426 aa11.63□□□□□ -0.55
RFX4-211ENST00000552866 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
RFX4-211ENST00000552866 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
RFX4-211ENST00000552866 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
RFX4-211ENST00000552866 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
RFX4-211ENST00000552866 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
RFX4-211ENST00000552866 SGIP1Q9BQI5 828 aa11.57□□□□□ -0.56
RFX4-211ENST00000552866 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
RFX4-211ENST00000552866 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
RFX4-211ENST00000552866 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
RFX4-211ENST00000552866 HOMEZQ8IX15 550 aa11.51□□□□□ -0.57
RFX4-211ENST00000552866 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
RFX4-211ENST00000552866 STK24Q9Y6E0 443 aa11.5□□□□□ -0.57
RFX4-211ENST00000552866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
RFX4-211ENST00000552866 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
RFX4-211ENST00000552866 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
RFX4-211ENST00000552866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
RFX4-211ENST00000552866 KCNV2Q8TDN2 545 aa11.43□□□□□ -0.58
RFX4-211ENST00000552866 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
RFX4-211ENST00000552866 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
RFX4-211ENST00000552866 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
RFX4-211ENST00000552866 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
RFX4-211ENST00000552866 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
RFX4-211ENST00000552866 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
RFX4-211ENST00000552866 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
RFX4-211ENST00000552866 POTEDQ86YR6 584 aa11.32□□□□□ -0.6
RFX4-211ENST00000552866 PYGBP11216 843 aa11.31□□□□□ -0.6
RFX4-211ENST00000552866 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
RFX4-211ENST00000552866 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
RFX4-211ENST00000552866 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
RFX4-211ENST00000552866 NEUROD2Q15784 382 aa11.25□□□□□ -0.61
RFX4-211ENST00000552866 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
RFX4-211ENST00000552866 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
RFX4-211ENST00000552866 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
RFX4-211ENST00000552866 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
RFX4-211ENST00000552866 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
RFX4-211ENST00000552866 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
RFX4-211ENST00000552866 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
RFX4-211ENST00000552866 E2F4Q16254 413 aa11.16□□□□□ -0.62
RFX4-211ENST00000552866 MFRPQ9BY79 579 aa11.16□□□□□ -0.62
RFX4-211ENST00000552866 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
RFX4-211ENST00000552866 SEMA3EO15041 775 aa11.13□□□□□ -0.63
RFX4-211ENST00000552866 ZMYND10O75800 440 aa11.1□□□□□ -0.63
RFX4-211ENST00000552866 SMYD5Q6GMV2 418 aa11.07□□□□□ -0.64
RFX4-211ENST00000552866 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
RFX4-211ENST00000552866 PSEN1P49768 467 aa11.05□□□□□ -0.64
RFX4-211ENST00000552866 PPP1R37O75864 691 aa11.04□□□□□ -0.64
RFX4-211ENST00000552866 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
RFX4-211ENST00000552866 PCDHB13Q9Y5F0 798 aa11.04□□□□□ -0.64
RFX4-211ENST00000552866 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
RFX4-211ENST00000552866 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
RFX4-211ENST00000552866 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
RFX4-211ENST00000552866 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
RFX4-211ENST00000552866 NLRP6P59044 892 aa11.01□□□□□ -0.65
RFX4-211ENST00000552866 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
RFX4-211ENST00000552866 SOX12O15370 315 aa10.97□□□□□ -0.65
RFX4-211ENST00000552866 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
RFX4-211ENST00000552866 MFSD10Q14728 455 aa10.96□□□□□ -0.65
RFX4-211ENST00000552866 AK7Q96M32 723 aa10.96□□□□□ -0.65
RFX4-211ENST00000552866 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
RFX4-211ENST00000552866 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
RFX4-211ENST00000552866 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
RFX4-211ENST00000552866 CCDC61Q9Y6R9 512 aa10.94□□□□□ -0.66
RFX4-211ENST00000552866 PDE4AP27815 886 aa10.93□□□□□ -0.66
RFX4-211ENST00000552866 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
RFX4-211ENST00000552866 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
RFX4-211ENST00000552866 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
RFX4-211ENST00000552866 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
RFX4-211ENST00000552866 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
RFX4-211ENST00000552866 GPBP1L1Q9HC44 474 aaPredicted RBP10.91□□□□□ -0.66
RFX4-211ENST00000552866 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
RFX4-211ENST00000552866 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
RFX4-211ENST00000552866 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
RFX4-211ENST00000552866 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
RFX4-211ENST00000552866 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
RFX4-211ENST00000552866 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
RFX4-211ENST00000552866 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
RFX4-211ENST00000552866 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
RFX4-211ENST00000552866 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
RFX4-211ENST00000552866 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
RFX4-211ENST00000552866 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
RFX4-211ENST00000552866 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
RFX4-211ENST00000552866 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
RFX4-211ENST00000552866 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
RFX4-211ENST00000552866 TRIM66O15016 1216 aa10.8□□□□□ -0.68
RFX4-211ENST00000552866 MLLT3P42568 568 aaPredicted RBP10.8□□□□□ -0.68
RFX4-211ENST00000552866 PDE4DQ08499 809 aa10.8□□□□□ -0.68
RFX4-211ENST00000552866 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
RFX4-211ENST00000552866 MAP3K13O43283 966 aa10.76□□□□□ -0.69
RFX4-211ENST00000552866 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
RFX4-211ENST00000552866 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms