RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 GSE1Q14687 1217 aa8.75□□□□□ -1.01
NPAS3-212ENST00000552696 EVX2Q03828 476 aa8.74□□□□□ -1.01
NPAS3-212ENST00000552696 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
NPAS3-212ENST00000552696 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
NPAS3-212ENST00000552696 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
NPAS3-212ENST00000552696 PKD2Q13563 968 aa8.72□□□□□ -1.01
NPAS3-212ENST00000552696 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
NPAS3-212ENST00000552696 PHF12Q96QT6 1004 aa8.7□□□□□ -1.02
NPAS3-212ENST00000552696 PYGBP11216 843 aa8.68□□□□□ -1.02
NPAS3-212ENST00000552696 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
NPAS3-212ENST00000552696 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
NPAS3-212ENST00000552696 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
NPAS3-212ENST00000552696 MAP3K13O43283 966 aa8.62□□□□□ -1.03
NPAS3-212ENST00000552696 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
NPAS3-212ENST00000552696 PCDHB13Q9Y5F0 798 aa8.6□□□□□ -1.03
NPAS3-212ENST00000552696 RGL2O15211 777 aa8.59□□□□□ -1.03
NPAS3-212ENST00000552696 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
NPAS3-212ENST00000552696 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
NPAS3-212ENST00000552696 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
NPAS3-212ENST00000552696 PCDHB8Q9UN66 801 aa8.57□□□□□ -1.04
NPAS3-212ENST00000552696 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
NPAS3-212ENST00000552696 GABBR2O75899 941 aa8.56□□□□□ -1.04
NPAS3-212ENST00000552696 SGIP1Q9BQI5 828 aa8.56□□□□□ -1.04
NPAS3-212ENST00000552696 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
NPAS3-212ENST00000552696 CLCN6P51797 869 aa8.55□□□□□ -1.04
NPAS3-212ENST00000552696 ZNF467Q7Z7K2 595 aaPredicted RBP8.55□□□□□ -1.04
NPAS3-212ENST00000552696 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
NPAS3-212ENST00000552696 DCAF8L2P0C7V8 631 aa8.5□□□□□ -1.05
NPAS3-212ENST00000552696 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
NPAS3-212ENST00000552696 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
NPAS3-212ENST00000552696 PSEN1P49768 467 aa8.47□□□□□ -1.05
NPAS3-212ENST00000552696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-212ENST00000552696 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-212ENST00000552696 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-212ENST00000552696 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
NPAS3-212ENST00000552696 TIE1P35590 1138 aa8.45□□□□□ -1.06
NPAS3-212ENST00000552696 TMEM106CQ9BVX2 250 aa8.44□□□□□ -1.06
NPAS3-212ENST00000552696 TTLL13PA6NNM8 815 aa8.43□□□□□ -1.06
NPAS3-212ENST00000552696 DCBLD2Q96PD2 775 aa8.43□□□□□ -1.06
NPAS3-212ENST00000552696 STK25O00506 426 aa8.42□□□□□ -1.06
NPAS3-212ENST00000552696 LHX8Q68G74 356 aa8.41□□□□□ -1.06
NPAS3-212ENST00000552696 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
NPAS3-212ENST00000552696 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
NPAS3-212ENST00000552696 CHGAP10645 457 aaKnown RBP8.4□□□□□ -1.06
NPAS3-212ENST00000552696 ASTLQ6HA08 431 aaPredicted RBP8.4□□□□□ -1.06
NPAS3-212ENST00000552696 HS6ST3Q8IZP7 471 aa8.4□□□□□ -1.06
NPAS3-212ENST00000552696 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
NPAS3-212ENST00000552696 POTEIP0CG38 1075 aa8.39□□□□□ -1.07
NPAS3-212ENST00000552696 ATN1P54259 1190 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-212ENST00000552696 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
NPAS3-212ENST00000552696 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
NPAS3-212ENST00000552696 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
NPAS3-212ENST00000552696 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
NPAS3-212ENST00000552696 EFCAB3Q8N7B9 438 aa8.33□□□□□ -1.08
NPAS3-212ENST00000552696 MKRN3Q13064 507 aaKnown RBP8.31□□□□□ -1.08
NPAS3-212ENST00000552696 NKX1-1Q15270 411 aaPredicted RBP8.29□□□□□ -1.08
NPAS3-212ENST00000552696 IER5LQ5T953 404 aa8.29□□□□□ -1.08
NPAS3-212ENST00000552696 SLC39A7Q92504 469 aa8.29□□□□□ -1.08
NPAS3-212ENST00000552696 DNAJC5Q9H3Z4 198 aa8.29□□□□□ -1.08
NPAS3-212ENST00000552696 METRNQ9UJH8 293 aa8.28□□□□□ -1.08
NPAS3-212ENST00000552696 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
NPAS3-212ENST00000552696 C7P10643 843 aa8.26□□□□□ -1.09
NPAS3-212ENST00000552696 MFRPQ9BY79 579 aa8.26□□□□□ -1.09
NPAS3-212ENST00000552696 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
NPAS3-212ENST00000552696 PHF8Q9UPP1 1060 aa8.26□□□□□ -1.09
NPAS3-212ENST00000552696 SOX12O15370 315 aa8.25□□□□□ -1.09
NPAS3-212ENST00000552696 IRX5P78411 483 aaPredicted RBP8.25□□□□□ -1.09
NPAS3-212ENST00000552696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.25□□□□□ -1.09
NPAS3-212ENST00000552696 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
NPAS3-212ENST00000552696 SEC24BO95487 1268 aa8.23□□□□□ -1.09
NPAS3-212ENST00000552696 PLCG2P16885 1265 aa8.23□□□□□ -1.09
NPAS3-212ENST00000552696 NLRP6P59044 892 aa8.23□□□□□ -1.09
NPAS3-212ENST00000552696 COLQQ9Y215 455 aaPredicted RBP8.23□□□□□ -1.09
NPAS3-212ENST00000552696 ILDR1Q86SU0 546 aaPredicted RBP8.22□□□□□ -1.09
NPAS3-212ENST00000552696 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
NPAS3-212ENST00000552696 FBXO22Q8NEZ5 403 aa8.22□□□□□ -1.09
NPAS3-212ENST00000552696 MS4A4AQ96JQ5 239 aa8.22□□□□□ -1.09
NPAS3-212ENST00000552696 OCEL1Q9H607 264 aa8.22□□□□□ -1.09
NPAS3-212ENST00000552696 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.22□□□□□ -1.09
NPAS3-212ENST00000552696 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
NPAS3-212ENST00000552696 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
NPAS3-212ENST00000552696 PAXIP1Q6ZW49 1069 aaPredicted RBP8.18□□□□□ -1.1
NPAS3-212ENST00000552696 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
NPAS3-212ENST00000552696 CFAP44Q96MT7 982 aa8.16□□□□□ -1.1
NPAS3-212ENST00000552696 PPP1R37O75864 691 aa8.15□□□□□ -1.1
NPAS3-212ENST00000552696 SPRYD3Q8NCJ5 442 aa8.15□□□□□ -1.1
NPAS3-212ENST00000552696 POTEB2H3BUK9 544 aa8.13□□□□□ -1.11
NPAS3-212ENST00000552696 PLCB2Q00722 1185 aa8.12□□□□□ -1.11
NPAS3-212ENST00000552696 BOLA1Q9Y3E2 137 aa8.11□□□□□ -1.11
NPAS3-212ENST00000552696 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
NPAS3-212ENST00000552696 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
NPAS3-212ENST00000552696 L3MBTL3Q96JM7 780 aaPredicted RBP8.1□□□□□ -1.11
NPAS3-212ENST00000552696 G3V3G9 751 aa8.09□□□□□ -1.11
NPAS3-212ENST00000552696 TMEM121BQ9BXQ6 578 aaPredicted RBP8.07□□□□□ -1.12
NPAS3-212ENST00000552696 C3orf67Q6ZVT6 689 aa8.06□□□□□ -1.12
NPAS3-212ENST00000552696 MAMSTRQ6ZN01 415 aa8.02□□□□□ -1.13
NPAS3-212ENST00000552696 SCUBE2Q9NQ36 999 aa8.02□□□□□ -1.13
NPAS3-212ENST00000552696 TSHZ2Q9NRE2 1034 aa8.02□□□□□ -1.13
NPAS3-212ENST00000552696 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
NPAS3-212ENST00000552696 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms