RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-206ENST00000552343 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-206ENST00000552343 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
HCFC2-206ENST00000552343 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
HCFC2-206ENST00000552343 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
HCFC2-206ENST00000552343 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
HCFC2-206ENST00000552343 C7P10643 843 aa12.94□□□□□ -0.34
HCFC2-206ENST00000552343 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
HCFC2-206ENST00000552343 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
HCFC2-206ENST00000552343 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-206ENST00000552343 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
HCFC2-206ENST00000552343 MIER1Q8N108 512 aa12.86□□□□□ -0.35
HCFC2-206ENST00000552343 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
HCFC2-206ENST00000552343 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
HCFC2-206ENST00000552343 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
HCFC2-206ENST00000552343 MAP3K13O43283 966 aa12.82□□□□□ -0.36
HCFC2-206ENST00000552343 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-206ENST00000552343 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
HCFC2-206ENST00000552343 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-206ENST00000552343 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
HCFC2-206ENST00000552343 TIE1P35590 1138 aa12.75□□□□□ -0.37
HCFC2-206ENST00000552343 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
HCFC2-206ENST00000552343 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
HCFC2-206ENST00000552343 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
HCFC2-206ENST00000552343 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
HCFC2-206ENST00000552343 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
HCFC2-206ENST00000552343 NUBP1P53384 320 aa12.64□□□□□ -0.39
HCFC2-206ENST00000552343 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
HCFC2-206ENST00000552343 SEC24BO95487 1268 aa12.63□□□□□ -0.39
HCFC2-206ENST00000552343 SGIP1Q9BQI5 828 aa12.63□□□□□ -0.39
HCFC2-206ENST00000552343 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-206ENST00000552343 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
HCFC2-206ENST00000552343 IER5LQ5T953 404 aa12.57□□□□□ -0.4
HCFC2-206ENST00000552343 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
HCFC2-206ENST00000552343 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
HCFC2-206ENST00000552343 FKBP8Q14318 412 aa12.52□□□□□ -0.41
HCFC2-206ENST00000552343 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
HCFC2-206ENST00000552343 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
HCFC2-206ENST00000552343 PLCG2P16885 1265 aa12.44□□□□□ -0.42
HCFC2-206ENST00000552343 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
HCFC2-206ENST00000552343 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
HCFC2-206ENST00000552343 IRX5P78411 483 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-206ENST00000552343 PYGBP11216 843 aa12.4□□□□□ -0.42
HCFC2-206ENST00000552343 ST18O60284 1047 aa12.37□□□□□ -0.43
HCFC2-206ENST00000552343 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
HCFC2-206ENST00000552343 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
HCFC2-206ENST00000552343 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
HCFC2-206ENST00000552343 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
HCFC2-206ENST00000552343 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
HCFC2-206ENST00000552343 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
HCFC2-206ENST00000552343 GSE1Q14687 1217 aa12.21□□□□□ -0.45
HCFC2-206ENST00000552343 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
HCFC2-206ENST00000552343 SNPHO15079 494 aa12.19□□□□□ -0.46
HCFC2-206ENST00000552343 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
HCFC2-206ENST00000552343 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
HCFC2-206ENST00000552343 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
HCFC2-206ENST00000552343 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
HCFC2-206ENST00000552343 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
HCFC2-206ENST00000552343 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
HCFC2-206ENST00000552343 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
HCFC2-206ENST00000552343 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
HCFC2-206ENST00000552343 PSEN1P49768 467 aa12.11□□□□□ -0.47
HCFC2-206ENST00000552343 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
HCFC2-206ENST00000552343 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
HCFC2-206ENST00000552343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
HCFC2-206ENST00000552343 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
HCFC2-206ENST00000552343 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
HCFC2-206ENST00000552343 EMP3P54852 163 aa12.01□□□□□ -0.49
HCFC2-206ENST00000552343 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
HCFC2-206ENST00000552343 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
HCFC2-206ENST00000552343 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
HCFC2-206ENST00000552343 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
HCFC2-206ENST00000552343 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
HCFC2-206ENST00000552343 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
HCFC2-206ENST00000552343 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
HCFC2-206ENST00000552343 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
HCFC2-206ENST00000552343 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
HCFC2-206ENST00000552343 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
HCFC2-206ENST00000552343 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
HCFC2-206ENST00000552343 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
HCFC2-206ENST00000552343 G3V3G9 751 aa11.9□□□□□ -0.5
HCFC2-206ENST00000552343 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
HCFC2-206ENST00000552343 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
HCFC2-206ENST00000552343 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
HCFC2-206ENST00000552343 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
HCFC2-206ENST00000552343 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
HCFC2-206ENST00000552343 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
HCFC2-206ENST00000552343 ERBB3P21860 1342 aa11.74□□□□□ -0.53
HCFC2-206ENST00000552343 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
HCFC2-206ENST00000552343 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
HCFC2-206ENST00000552343 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
HCFC2-206ENST00000552343 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
HCFC2-206ENST00000552343 SOX12O15370 315 aa11.65□□□□□ -0.54
HCFC2-206ENST00000552343 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
HCFC2-206ENST00000552343 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
HCFC2-206ENST00000552343 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-206ENST00000552343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-206ENST00000552343 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-206ENST00000552343 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
HCFC2-206ENST00000552343 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms