RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 MS4A3Q96HJ5 214 aa16.42■□□□□ 0.22
BEST3-211ENST00000552295 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
BEST3-211ENST00000552295 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
BEST3-211ENST00000552295 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
BEST3-211ENST00000552295 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
BEST3-211ENST00000552295 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
BEST3-211ENST00000552295 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
BEST3-211ENST00000552295 ATMINO43313 823 aaPredicted RBP16.26■□□□□ 0.19
BEST3-211ENST00000552295 SLC39A7Q92504 469 aa16.21■□□□□ 0.19
BEST3-211ENST00000552295 MAP3K13O43283 966 aa16.2■□□□□ 0.18
BEST3-211ENST00000552295 METRNQ9UJH8 293 aa16.2■□□□□ 0.18
BEST3-211ENST00000552295 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
BEST3-211ENST00000552295 C7P10643 843 aa16.18■□□□□ 0.18
BEST3-211ENST00000552295 NUBP1P53384 320 aa16.17■□□□□ 0.18
BEST3-211ENST00000552295 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
BEST3-211ENST00000552295 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
BEST3-211ENST00000552295 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
BEST3-211ENST00000552295 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
BEST3-211ENST00000552295 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
BEST3-211ENST00000552295 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
BEST3-211ENST00000552295 TIE1P35590 1138 aa16.1■□□□□ 0.17
BEST3-211ENST00000552295 SGIP1Q9BQI5 828 aa16.08■□□□□ 0.16
BEST3-211ENST00000552295 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
BEST3-211ENST00000552295 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
BEST3-211ENST00000552295 MAMSTRQ6ZN01 415 aa15.98■□□□□ 0.15
BEST3-211ENST00000552295 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
BEST3-211ENST00000552295 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
BEST3-211ENST00000552295 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
BEST3-211ENST00000552295 VASPP50552 380 aaPredicted RBP15.94■□□□□ 0.14
BEST3-211ENST00000552295 POTEFA5A3E0 1075 aa15.91■□□□□ 0.14
BEST3-211ENST00000552295 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
BEST3-211ENST00000552295 SCUBE2Q9NQ36 999 aa15.9■□□□□ 0.14
BEST3-211ENST00000552295 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
BEST3-211ENST00000552295 SEC24BO95487 1268 aa15.89■□□□□ 0.13
BEST3-211ENST00000552295 IER5LQ5T953 404 aa15.87■□□□□ 0.13
BEST3-211ENST00000552295 PYGBP11216 843 aa15.86■□□□□ 0.13
BEST3-211ENST00000552295 TMEM106CQ9BVX2 250 aa15.86■□□□□ 0.13
BEST3-211ENST00000552295 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
BEST3-211ENST00000552295 ABCC9O60706 1549 aa15.83■□□□□ 0.12
BEST3-211ENST00000552295 GSE1Q14687 1217 aa15.8■□□□□ 0.12
BEST3-211ENST00000552295 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
BEST3-211ENST00000552295 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
BEST3-211ENST00000552295 POTEMA6NI47 508 aa15.73■□□□□ 0.11
BEST3-211ENST00000552295 PLCG2P16885 1265 aa15.7■□□□□ 0.1
BEST3-211ENST00000552295 POTEGQ6S5H5 508 aa15.69■□□□□ 0.1
BEST3-211ENST00000552295 ZNF467Q7Z7K2 595 aaPredicted RBP15.67■□□□□ 0.1
BEST3-211ENST00000552295 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
BEST3-211ENST00000552295 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
BEST3-211ENST00000552295 SPOCK2Q92563 424 aa15.64■□□□□ 0.09
BEST3-211ENST00000552295 FAM163AQ96GL9 167 aaPredicted RBP15.64■□□□□ 0.09
BEST3-211ENST00000552295 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
BEST3-211ENST00000552295 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
BEST3-211ENST00000552295 OCEL1Q9H607 264 aa15.61■□□□□ 0.09
BEST3-211ENST00000552295 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
BEST3-211ENST00000552295 LCE2DQ5TA82 110 aaPredicted RBP15.57■□□□□ 0.08
BEST3-211ENST00000552295 SLAIN1Q8ND83 568 aa15.55■□□□□ 0.08
BEST3-211ENST00000552295 CIZ1Q9ULV3 898 aaPredicted RBP15.55■□□□□ 0.08
BEST3-211ENST00000552295 GOLGA2Q08379 1002 aa15.54■□□□□ 0.08
BEST3-211ENST00000552295 PSEN1P49768 467 aa15.52■□□□□ 0.08
BEST3-211ENST00000552295 MYO15BQ96JP2 1530 aa15.52■□□□□ 0.07
BEST3-211ENST00000552295 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
BEST3-211ENST00000552295 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
BEST3-211ENST00000552295 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
BEST3-211ENST00000552295 NACADO15069 1562 aa15.48■□□□□ 0.07
BEST3-211ENST00000552295 PDAP1Q13442 181 aaKnown RBP15.45■□□□□ 0.06
BEST3-211ENST00000552295 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
BEST3-211ENST00000552295 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
BEST3-211ENST00000552295 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
BEST3-211ENST00000552295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.05
BEST3-211ENST00000552295 L3MBTL3Q96JM7 780 aaPredicted RBP15.37■□□□□ 0.05
BEST3-211ENST00000552295 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
BEST3-211ENST00000552295 ST18O60284 1047 aa15.33■□□□□ 0.04
BEST3-211ENST00000552295 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.04
BEST3-211ENST00000552295 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
BEST3-211ENST00000552295 SNPHO15079 494 aa15.31■□□□□ 0.04
BEST3-211ENST00000552295 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
BEST3-211ENST00000552295 CDAN1Q8IWY9 1227 aa15.23■□□□□ 0.03
BEST3-211ENST00000552295 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
BEST3-211ENST00000552295 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
BEST3-211ENST00000552295 G3V3G9 751 aa15.2■□□□□ 0.02
BEST3-211ENST00000552295 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
BEST3-211ENST00000552295 BOLA1Q9Y3E2 137 aa15.15■□□□□ 0.02
BEST3-211ENST00000552295 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
BEST3-211ENST00000552295 RIOK3O14730 519 aaKnown RBP15.13■□□□□ 0.01
BEST3-211ENST00000552295 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
BEST3-211ENST00000552295 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
BEST3-211ENST00000552295 MARVELD3Q96A59 401 aa15.09■□□□□ 0.01
BEST3-211ENST00000552295 RNF25Q96BH1 459 aaPredicted RBP15.08■□□□□ 0
BEST3-211ENST00000552295 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
BEST3-211ENST00000552295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.05■□□□□ -0
BEST3-211ENST00000552295 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
BEST3-211ENST00000552295 SOX12O15370 315 aa15.01□□□□□ -0.01
BEST3-211ENST00000552295 EMP3P54852 163 aa15.01□□□□□ -0.01
BEST3-211ENST00000552295 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
BEST3-211ENST00000552295 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
BEST3-211ENST00000552295 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
BEST3-211ENST00000552295 HOXB3P14651 431 aaPredicted RBP14.92□□□□□ -0.02
BEST3-211ENST00000552295 PHF8Q9UPP1 1060 aa14.92□□□□□ -0.02
BEST3-211ENST00000552295 DOK7Q18PE1 504 aa14.9□□□□□ -0.02
BEST3-211ENST00000552295 ZNF710Q8N1W2 664 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms