RNA–Protein interactions for RNA: ENST00000552248.5

CNTN1-210, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-210ENST00000552248 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
CNTN1-210ENST00000552248 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
CNTN1-210ENST00000552248 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.25
CNTN1-210ENST00000552248 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
CNTN1-210ENST00000552248 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
CNTN1-210ENST00000552248 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
CNTN1-210ENST00000552248 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
CNTN1-210ENST00000552248 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
CNTN1-210ENST00000552248 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
CNTN1-210ENST00000552248 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
CNTN1-210ENST00000552248 MAP3K13O43283 966 aa13.38□□□□□ -0.27
CNTN1-210ENST00000552248 GSE1Q14687 1217 aa13.38□□□□□ -0.27
CNTN1-210ENST00000552248 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
CNTN1-210ENST00000552248 PYGBP11216 843 aa13.33□□□□□ -0.28
CNTN1-210ENST00000552248 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
CNTN1-210ENST00000552248 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
CNTN1-210ENST00000552248 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
CNTN1-210ENST00000552248 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
CNTN1-210ENST00000552248 ASTLQ6HA08 431 aaPredicted RBP13.21□□□□□ -0.29
CNTN1-210ENST00000552248 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
CNTN1-210ENST00000552248 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
CNTN1-210ENST00000552248 TIE1P35590 1138 aa13.19□□□□□ -0.3
CNTN1-210ENST00000552248 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
CNTN1-210ENST00000552248 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
CNTN1-210ENST00000552248 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
CNTN1-210ENST00000552248 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
CNTN1-210ENST00000552248 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
CNTN1-210ENST00000552248 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
CNTN1-210ENST00000552248 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
CNTN1-210ENST00000552248 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CNTN1-210ENST00000552248 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
CNTN1-210ENST00000552248 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
CNTN1-210ENST00000552248 LHX8Q68G74 356 aa13.1□□□□□ -0.31
CNTN1-210ENST00000552248 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
CNTN1-210ENST00000552248 C7P10643 843 aa13.08□□□□□ -0.32
CNTN1-210ENST00000552248 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
CNTN1-210ENST00000552248 PSEN1P49768 467 aa13.01□□□□□ -0.33
CNTN1-210ENST00000552248 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
CNTN1-210ENST00000552248 SEC24BO95487 1268 aa12.99□□□□□ -0.33
CNTN1-210ENST00000552248 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CNTN1-210ENST00000552248 IER5LQ5T953 404 aa12.97□□□□□ -0.33
CNTN1-210ENST00000552248 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.33
CNTN1-210ENST00000552248 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
CNTN1-210ENST00000552248 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
CNTN1-210ENST00000552248 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
CNTN1-210ENST00000552248 PLCG2P16885 1265 aa12.89□□□□□ -0.35
CNTN1-210ENST00000552248 PKD2Q13563 968 aa12.89□□□□□ -0.35
CNTN1-210ENST00000552248 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
CNTN1-210ENST00000552248 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
CNTN1-210ENST00000552248 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
CNTN1-210ENST00000552248 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
CNTN1-210ENST00000552248 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
CNTN1-210ENST00000552248 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
CNTN1-210ENST00000552248 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
CNTN1-210ENST00000552248 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
CNTN1-210ENST00000552248 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
CNTN1-210ENST00000552248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
CNTN1-210ENST00000552248 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
CNTN1-210ENST00000552248 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
CNTN1-210ENST00000552248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNTN1-210ENST00000552248 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
CNTN1-210ENST00000552248 RGL2O15211 777 aa12.78□□□□□ -0.36
CNTN1-210ENST00000552248 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
CNTN1-210ENST00000552248 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
CNTN1-210ENST00000552248 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
CNTN1-210ENST00000552248 STK25O00506 426 aa12.72□□□□□ -0.37
CNTN1-210ENST00000552248 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
CNTN1-210ENST00000552248 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
CNTN1-210ENST00000552248 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
CNTN1-210ENST00000552248 G3V3G9 751 aa12.65□□□□□ -0.38
CNTN1-210ENST00000552248 SOX12O15370 315 aa12.64□□□□□ -0.39
CNTN1-210ENST00000552248 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
CNTN1-210ENST00000552248 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
CNTN1-210ENST00000552248 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
CNTN1-210ENST00000552248 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
CNTN1-210ENST00000552248 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
CNTN1-210ENST00000552248 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
CNTN1-210ENST00000552248 NLRP6P59044 892 aa12.57□□□□□ -0.4
CNTN1-210ENST00000552248 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
CNTN1-210ENST00000552248 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
CNTN1-210ENST00000552248 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
CNTN1-210ENST00000552248 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.41
CNTN1-210ENST00000552248 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
CNTN1-210ENST00000552248 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
CNTN1-210ENST00000552248 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
CNTN1-210ENST00000552248 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
CNTN1-210ENST00000552248 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
CNTN1-210ENST00000552248 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
CNTN1-210ENST00000552248 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
CNTN1-210ENST00000552248 SNPHO15079 494 aa12.41□□□□□ -0.42
CNTN1-210ENST00000552248 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
CNTN1-210ENST00000552248 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
CNTN1-210ENST00000552248 RYDENQ9NUL5 291 aaKnown RBP12.33□□□□□ -0.44
CNTN1-210ENST00000552248 POTEMA6NI47 508 aa12.31□□□□□ -0.44
CNTN1-210ENST00000552248 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
CNTN1-210ENST00000552248 PPP1R37O75864 691 aa12.3□□□□□ -0.44
CNTN1-210ENST00000552248 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
CNTN1-210ENST00000552248 ST18O60284 1047 aa12.29□□□□□ -0.44
CNTN1-210ENST00000552248 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
CNTN1-210ENST00000552248 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms