RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 MIER1Q8N108 512 aa8.91□□□□□ -0.98
LSM6P2-201ENST00000552208 SPRYD3Q8NCJ5 442 aa8.9□□□□□ -0.98
LSM6P2-201ENST00000552208 GABBR2O75899 941 aa8.89□□□□□ -0.99
LSM6P2-201ENST00000552208 TSHZ2Q9NRE2 1034 aa8.89□□□□□ -0.99
LSM6P2-201ENST00000552208 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
LSM6P2-201ENST00000552208 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
LSM6P2-201ENST00000552208 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
LSM6P2-201ENST00000552208 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
LSM6P2-201ENST00000552208 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
LSM6P2-201ENST00000552208 TRIM41Q8WV44 630 aa8.81□□□□□ -1
LSM6P2-201ENST00000552208 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
LSM6P2-201ENST00000552208 HS6ST3Q8IZP7 471 aa8.79□□□□□ -1
LSM6P2-201ENST00000552208 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
LSM6P2-201ENST00000552208 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
LSM6P2-201ENST00000552208 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
LSM6P2-201ENST00000552208 NUBP1P53384 320 aa8.71□□□□□ -1.02
LSM6P2-201ENST00000552208 GSE1Q14687 1217 aa8.7□□□□□ -1.02
LSM6P2-201ENST00000552208 POTEIP0CG38 1075 aa8.69□□□□□ -1.02
LSM6P2-201ENST00000552208 NKX1-1Q15270 411 aaPredicted RBP8.69□□□□□ -1.02
LSM6P2-201ENST00000552208 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
LSM6P2-201ENST00000552208 POTEMA6NI47 508 aa8.66□□□□□ -1.02
LSM6P2-201ENST00000552208 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
LSM6P2-201ENST00000552208 RIOK3O14730 519 aaKnown RBP8.64□□□□□ -1.03
LSM6P2-201ENST00000552208 NBR1Q14596 966 aa8.63□□□□□ -1.03
LSM6P2-201ENST00000552208 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
LSM6P2-201ENST00000552208 MNX1P50219 401 aaPredicted RBP8.61□□□□□ -1.03
LSM6P2-201ENST00000552208 PCDH10Q9P2E7 1040 aa8.6□□□□□ -1.03
LSM6P2-201ENST00000552208 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
LSM6P2-201ENST00000552208 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
LSM6P2-201ENST00000552208 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
LSM6P2-201ENST00000552208 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
LSM6P2-201ENST00000552208 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
LSM6P2-201ENST00000552208 STK25O00506 426 aa8.55□□□□□ -1.04
LSM6P2-201ENST00000552208 PRR29P0C7W0 189 aa8.55□□□□□ -1.04
LSM6P2-201ENST00000552208 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
LSM6P2-201ENST00000552208 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
LSM6P2-201ENST00000552208 CLEC11AQ9Y240 323 aa8.53□□□□□ -1.04
LSM6P2-201ENST00000552208 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
LSM6P2-201ENST00000552208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.5□□□□□ -1.05
LSM6P2-201ENST00000552208 CLCN6P51797 869 aa8.5□□□□□ -1.05
LSM6P2-201ENST00000552208 ZFP91Q96JP5 570 aaPredicted RBP8.5□□□□□ -1.05
LSM6P2-201ENST00000552208 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
LSM6P2-201ENST00000552208 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
LSM6P2-201ENST00000552208 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
LSM6P2-201ENST00000552208 STK24Q9Y6E0 443 aa8.46□□□□□ -1.06
LSM6P2-201ENST00000552208 CHADLQ6NUI6 762 aa8.45□□□□□ -1.06
LSM6P2-201ENST00000552208 PYGBP11216 843 aa8.42□□□□□ -1.06
LSM6P2-201ENST00000552208 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
LSM6P2-201ENST00000552208 CD44P16070 742 aaKnown RBP8.4□□□□□ -1.06
LSM6P2-201ENST00000552208 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
LSM6P2-201ENST00000552208 CADPS2Q86UW7 1296 aa8.38□□□□□ -1.07
LSM6P2-201ENST00000552208 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
LSM6P2-201ENST00000552208 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
LSM6P2-201ENST00000552208 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
LSM6P2-201ENST00000552208 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
LSM6P2-201ENST00000552208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
LSM6P2-201ENST00000552208 KCNV2Q8TDN2 545 aa8.34□□□□□ -1.07
LSM6P2-201ENST00000552208 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
LSM6P2-201ENST00000552208 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
LSM6P2-201ENST00000552208 FARP1Q9Y4F1 1045 aaPredicted RBP8.3□□□□□ -1.08
LSM6P2-201ENST00000552208 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
LSM6P2-201ENST00000552208 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
LSM6P2-201ENST00000552208 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
LSM6P2-201ENST00000552208 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
LSM6P2-201ENST00000552208 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
LSM6P2-201ENST00000552208 PCDHB8Q9UN66 801 aa8.26□□□□□ -1.09
LSM6P2-201ENST00000552208 PCDHB13Q9Y5F0 798 aa8.26□□□□□ -1.09
LSM6P2-201ENST00000552208 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
LSM6P2-201ENST00000552208 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
LSM6P2-201ENST00000552208 ARHGEF1Q92888 912 aaKnown RBP8.24□□□□□ -1.09
LSM6P2-201ENST00000552208 CCDC61Q9Y6R9 512 aa8.24□□□□□ -1.09
LSM6P2-201ENST00000552208 PSEN1P49768 467 aa8.23□□□□□ -1.09
LSM6P2-201ENST00000552208 PPP1R37O75864 691 aa8.22□□□□□ -1.09
LSM6P2-201ENST00000552208 FBXO22Q8NEZ5 403 aa8.22□□□□□ -1.09
LSM6P2-201ENST00000552208 PAK3O75914 559 aaPredicted RBP8.21□□□□□ -1.1
LSM6P2-201ENST00000552208 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
LSM6P2-201ENST00000552208 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
LSM6P2-201ENST00000552208 TESPA1A2RU30 521 aaPredicted RBP8.18□□□□□ -1.1
LSM6P2-201ENST00000552208 E2F4Q16254 413 aa8.18□□□□□ -1.1
LSM6P2-201ENST00000552208 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
LSM6P2-201ENST00000552208 FAM163AQ96GL9 167 aaPredicted RBP8.18□□□□□ -1.1
LSM6P2-201ENST00000552208 SOX12O15370 315 aa8.16□□□□□ -1.1
LSM6P2-201ENST00000552208 NLRP6P59044 892 aa8.15□□□□□ -1.1
LSM6P2-201ENST00000552208 IFNL1Q8IU54 200 aa8.15□□□□□ -1.1
LSM6P2-201ENST00000552208 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
LSM6P2-201ENST00000552208 ARXQ96QS3 562 aa8.15□□□□□ -1.1
LSM6P2-201ENST00000552208 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.1
LSM6P2-201ENST00000552208 SEMA3EO15041 775 aa8.14□□□□□ -1.11
LSM6P2-201ENST00000552208 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
LSM6P2-201ENST00000552208 NCKAP5LQ9HCH0 1330 aa8.13□□□□□ -1.11
LSM6P2-201ENST00000552208 MAMSTRQ6ZN01 415 aa8.13□□□□□ -1.11
LSM6P2-201ENST00000552208 POTEJP0CG39 1038 aa8.12□□□□□ -1.11
LSM6P2-201ENST00000552208 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
LSM6P2-201ENST00000552208 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
LSM6P2-201ENST00000552208 MAP3K13O43283 966 aa8.11□□□□□ -1.11
LSM6P2-201ENST00000552208 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
LSM6P2-201ENST00000552208 MFSD10Q14728 455 aa8.1□□□□□ -1.11
LSM6P2-201ENST00000552208 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
LSM6P2-201ENST00000552208 CABP2Q9NPB3 220 aa8.1□□□□□ -1.11
LSM6P2-201ENST00000552208 ZMYND10O75800 440 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms