RNA–Protein interactions for RNA: ENST00000551070.5

KRR1-205, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-205ENST00000551070 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
KRR1-205ENST00000551070 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
KRR1-205ENST00000551070 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
KRR1-205ENST00000551070 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
KRR1-205ENST00000551070 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
KRR1-205ENST00000551070 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
KRR1-205ENST00000551070 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
KRR1-205ENST00000551070 POTEMA6NI47 508 aa12.21□□□□□ -0.45
KRR1-205ENST00000551070 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
KRR1-205ENST00000551070 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
KRR1-205ENST00000551070 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
KRR1-205ENST00000551070 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
KRR1-205ENST00000551070 TIE1P35590 1138 aa12.13□□□□□ -0.47
KRR1-205ENST00000551070 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
KRR1-205ENST00000551070 MIER1Q8N108 512 aa12.12□□□□□ -0.47
KRR1-205ENST00000551070 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
KRR1-205ENST00000551070 BMP2KQ9NSY1 1161 aaPredicted RBP12.08□□□□□ -0.48
KRR1-205ENST00000551070 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
KRR1-205ENST00000551070 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
KRR1-205ENST00000551070 MAP3K13O43283 966 aa12.06□□□□□ -0.48
KRR1-205ENST00000551070 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
KRR1-205ENST00000551070 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
KRR1-205ENST00000551070 IER5LQ5T953 404 aa12□□□□□ -0.49
KRR1-205ENST00000551070 SEC24BO95487 1268 aa11.99□□□□□ -0.49
KRR1-205ENST00000551070 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
KRR1-205ENST00000551070 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
KRR1-205ENST00000551070 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
KRR1-205ENST00000551070 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
KRR1-205ENST00000551070 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
KRR1-205ENST00000551070 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
KRR1-205ENST00000551070 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
KRR1-205ENST00000551070 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
KRR1-205ENST00000551070 NUBP1P53384 320 aa11.89□□□□□ -0.51
KRR1-205ENST00000551070 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
KRR1-205ENST00000551070 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
KRR1-205ENST00000551070 PLCG2P16885 1265 aa11.8□□□□□ -0.52
KRR1-205ENST00000551070 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
KRR1-205ENST00000551070 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
KRR1-205ENST00000551070 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
KRR1-205ENST00000551070 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
KRR1-205ENST00000551070 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
KRR1-205ENST00000551070 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
KRR1-205ENST00000551070 FKBP8Q14318 412 aa11.7□□□□□ -0.54
KRR1-205ENST00000551070 SNPHO15079 494 aa11.69□□□□□ -0.54
KRR1-205ENST00000551070 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
KRR1-205ENST00000551070 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
KRR1-205ENST00000551070 ST18O60284 1047 aa11.68□□□□□ -0.54
KRR1-205ENST00000551070 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
KRR1-205ENST00000551070 PYGBP11216 843 aa11.63□□□□□ -0.55
KRR1-205ENST00000551070 GSE1Q14687 1217 aa11.6□□□□□ -0.55
KRR1-205ENST00000551070 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
KRR1-205ENST00000551070 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
KRR1-205ENST00000551070 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
KRR1-205ENST00000551070 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
KRR1-205ENST00000551070 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
KRR1-205ENST00000551070 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
KRR1-205ENST00000551070 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
KRR1-205ENST00000551070 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
KRR1-205ENST00000551070 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
KRR1-205ENST00000551070 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
KRR1-205ENST00000551070 MMRN1Q13201 1228 aa11.44□□□□□ -0.58
KRR1-205ENST00000551070 SPNS2Q8IVW8 549 aa11.44□□□□□ -0.58
KRR1-205ENST00000551070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.589e-7■■■□□ 18.8
KRR1-205ENST00000551070 PSEN1P49768 467 aa11.42□□□□□ -0.58
KRR1-205ENST00000551070 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
KRR1-205ENST00000551070 EMP3P54852 163 aa11.39□□□□□ -0.59
KRR1-205ENST00000551070 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
KRR1-205ENST00000551070 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
KRR1-205ENST00000551070 G3V3G9 751 aa11.35□□□□□ -0.59
KRR1-205ENST00000551070 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
KRR1-205ENST00000551070 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
KRR1-205ENST00000551070 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
KRR1-205ENST00000551070 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
KRR1-205ENST00000551070 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
KRR1-205ENST00000551070 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
KRR1-205ENST00000551070 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
KRR1-205ENST00000551070 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
KRR1-205ENST00000551070 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
KRR1-205ENST00000551070 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
KRR1-205ENST00000551070 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
KRR1-205ENST00000551070 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
KRR1-205ENST00000551070 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
KRR1-205ENST00000551070 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
KRR1-205ENST00000551070 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
KRR1-205ENST00000551070 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
KRR1-205ENST00000551070 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
KRR1-205ENST00000551070 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
KRR1-205ENST00000551070 ERBB3P21860 1342 aa11.12□□□□□ -0.63
KRR1-205ENST00000551070 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
KRR1-205ENST00000551070 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
KRR1-205ENST00000551070 SOX12O15370 315 aa11.06□□□□□ -0.64
KRR1-205ENST00000551070 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
KRR1-205ENST00000551070 PTGER2P43116 358 aa11.02□□□□□ -0.65
KRR1-205ENST00000551070 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
KRR1-205ENST00000551070 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
KRR1-205ENST00000551070 ZNF687Q8N1G0 1237 aa11□□□□□ -0.65
KRR1-205ENST00000551070 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
KRR1-205ENST00000551070 VGFO15240 615 aaPredicted RBP10.97□□□□□ -0.65
KRR1-205ENST00000551070 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
KRR1-205ENST00000551070 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms