RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
SMARCC2-211ENST00000550859 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
SMARCC2-211ENST00000550859 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
SMARCC2-211ENST00000550859 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-211ENST00000550859 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
SMARCC2-211ENST00000550859 PKD2Q13563 968 aa11.86□□□□□ -0.51
SMARCC2-211ENST00000550859 PYGBP11216 843 aa11.84□□□□□ -0.51
SMARCC2-211ENST00000550859 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
SMARCC2-211ENST00000550859 EVX2Q03828 476 aa11.82□□□□□ -0.52
SMARCC2-211ENST00000550859 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
SMARCC2-211ENST00000550859 CLCN6P51797 869 aa11.79□□□□□ -0.52
SMARCC2-211ENST00000550859 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
SMARCC2-211ENST00000550859 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
SMARCC2-211ENST00000550859 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
SMARCC2-211ENST00000550859 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
SMARCC2-211ENST00000550859 MAP3K13O43283 966 aa11.74□□□□□ -0.53
SMARCC2-211ENST00000550859 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-211ENST00000550859 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
SMARCC2-211ENST00000550859 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-211ENST00000550859 RGL2O15211 777 aa11.69□□□□□ -0.54
SMARCC2-211ENST00000550859 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
SMARCC2-211ENST00000550859 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
SMARCC2-211ENST00000550859 GABBR2O75899 941 aa11.66□□□□□ -0.54
SMARCC2-211ENST00000550859 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
SMARCC2-211ENST00000550859 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
SMARCC2-211ENST00000550859 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
SMARCC2-211ENST00000550859 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-211ENST00000550859 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-211ENST00000550859 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-211ENST00000550859 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-211ENST00000550859 PSEN1P49768 467 aa11.57□□□□□ -0.56
SMARCC2-211ENST00000550859 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
SMARCC2-211ENST00000550859 TIE1P35590 1138 aa11.53□□□□□ -0.56
SMARCC2-211ENST00000550859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
SMARCC2-211ENST00000550859 STK25O00506 426 aa11.52□□□□□ -0.57
SMARCC2-211ENST00000550859 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-211ENST00000550859 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
SMARCC2-211ENST00000550859 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
SMARCC2-211ENST00000550859 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
SMARCC2-211ENST00000550859 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
SMARCC2-211ENST00000550859 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
SMARCC2-211ENST00000550859 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
SMARCC2-211ENST00000550859 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
SMARCC2-211ENST00000550859 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
SMARCC2-211ENST00000550859 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
SMARCC2-211ENST00000550859 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
SMARCC2-211ENST00000550859 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
SMARCC2-211ENST00000550859 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
SMARCC2-211ENST00000550859 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
SMARCC2-211ENST00000550859 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
SMARCC2-211ENST00000550859 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
SMARCC2-211ENST00000550859 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
SMARCC2-211ENST00000550859 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-211ENST00000550859 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
SMARCC2-211ENST00000550859 SOX12O15370 315 aa11.34□□□□□ -0.59
SMARCC2-211ENST00000550859 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
SMARCC2-211ENST00000550859 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
SMARCC2-211ENST00000550859 IER5LQ5T953 404 aa11.33□□□□□ -0.6
SMARCC2-211ENST00000550859 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
SMARCC2-211ENST00000550859 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-211ENST00000550859 C7P10643 843 aa11.31□□□□□ -0.6
SMARCC2-211ENST00000550859 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-211ENST00000550859 SEC24BO95487 1268 aa11.29□□□□□ -0.6
SMARCC2-211ENST00000550859 NLRP6P59044 892 aa11.29□□□□□ -0.6
SMARCC2-211ENST00000550859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■□□ 17.4
SMARCC2-211ENST00000550859 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
SMARCC2-211ENST00000550859 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
SMARCC2-211ENST00000550859 PLCG2P16885 1265 aa11.24□□□□□ -0.61
SMARCC2-211ENST00000550859 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-211ENST00000550859 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
SMARCC2-211ENST00000550859 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
SMARCC2-211ENST00000550859 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
SMARCC2-211ENST00000550859 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-211ENST00000550859 PAXIP1Q6ZW49 1069 aaPredicted RBP11.21□□□□□ -0.61
SMARCC2-211ENST00000550859 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
SMARCC2-211ENST00000550859 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-211ENST00000550859 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-211ENST00000550859 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
SMARCC2-211ENST00000550859 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
SMARCC2-211ENST00000550859 G3V3G9 751 aa11.16□□□□□ -0.62
SMARCC2-211ENST00000550859 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-211ENST00000550859 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-211ENST00000550859 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
SMARCC2-211ENST00000550859 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
SMARCC2-211ENST00000550859 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
SMARCC2-211ENST00000550859 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
SMARCC2-211ENST00000550859 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
SMARCC2-211ENST00000550859 PPP1R37O75864 691 aa11.07□□□□□ -0.64
SMARCC2-211ENST00000550859 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
SMARCC2-211ENST00000550859 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
SMARCC2-211ENST00000550859 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
SMARCC2-211ENST00000550859 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
SMARCC2-211ENST00000550859 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
SMARCC2-211ENST00000550859 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
SMARCC2-211ENST00000550859 LHX8Q68G74 356 aa10.99□□□□□ -0.65
SMARCC2-211ENST00000550859 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
SMARCC2-211ENST00000550859 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-211ENST00000550859 TSHZ2Q9NRE2 1034 aa10.96□□□□□ -0.65
SMARCC2-211ENST00000550859 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
SMARCC2-211ENST00000550859 PDE4AP27815 886 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms