RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
TSPAN8-205ENST00000550818 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
TSPAN8-205ENST00000550818 C7P10643 843 aa12.42□□□□□ -0.42
TSPAN8-205ENST00000550818 SLC39A7Q92504 469 aa12.4□□□□□ -0.42
TSPAN8-205ENST00000550818 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
TSPAN8-205ENST00000550818 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
TSPAN8-205ENST00000550818 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
TSPAN8-205ENST00000550818 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
TSPAN8-205ENST00000550818 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
TSPAN8-205ENST00000550818 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
TSPAN8-205ENST00000550818 KIF12Q96FN5 646 aa12.27□□□□□ -0.45
TSPAN8-205ENST00000550818 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
TSPAN8-205ENST00000550818 PROM2Q8N271 834 aa12.26□□□□□ -0.45
TSPAN8-205ENST00000550818 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
TSPAN8-205ENST00000550818 FAM163AQ96GL9 167 aaPredicted RBP12.24□□□□□ -0.45
TSPAN8-205ENST00000550818 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
TSPAN8-205ENST00000550818 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
TSPAN8-205ENST00000550818 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
TSPAN8-205ENST00000550818 MAP3K13O43283 966 aa12.16□□□□□ -0.46
TSPAN8-205ENST00000550818 TIE1P35590 1138 aa12.13□□□□□ -0.47
TSPAN8-205ENST00000550818 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
TSPAN8-205ENST00000550818 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
TSPAN8-205ENST00000550818 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
TSPAN8-205ENST00000550818 MIER1Q8N108 512 aa12.05□□□□□ -0.48
TSPAN8-205ENST00000550818 SEC24BO95487 1268 aa12.04□□□□□ -0.48
TSPAN8-205ENST00000550818 PLEKHG5O94827 1062 aa12□□□□□ -0.49
TSPAN8-205ENST00000550818 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
TSPAN8-205ENST00000550818 IER5LQ5T953 404 aa11.98□□□□□ -0.49
TSPAN8-205ENST00000550818 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
TSPAN8-205ENST00000550818 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
TSPAN8-205ENST00000550818 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
TSPAN8-205ENST00000550818 NUBP1P53384 320 aa11.91□□□□□ -0.5
TSPAN8-205ENST00000550818 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
TSPAN8-205ENST00000550818 ST18O60284 1047 aa11.9□□□□□ -0.5
TSPAN8-205ENST00000550818 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
TSPAN8-205ENST00000550818 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
TSPAN8-205ENST00000550818 TMEM106CQ9BVX2 250 aa11.86□□□□□ -0.51
TSPAN8-205ENST00000550818 PLCG2P16885 1265 aa11.82□□□□□ -0.52
TSPAN8-205ENST00000550818 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
TSPAN8-205ENST00000550818 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
TSPAN8-205ENST00000550818 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
TSPAN8-205ENST00000550818 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
TSPAN8-205ENST00000550818 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
TSPAN8-205ENST00000550818 SPNS2Q8IVW8 549 aa11.72□□□□□ -0.53
TSPAN8-205ENST00000550818 TMEM121BQ9BXQ6 578 aaPredicted RBP11.72□□□□□ -0.53
TSPAN8-205ENST00000550818 MARVELD3Q96A59 401 aa11.67□□□□□ -0.54
TSPAN8-205ENST00000550818 PYGBP11216 843 aa11.66□□□□□ -0.54
TSPAN8-205ENST00000550818 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
TSPAN8-205ENST00000550818 SNPHO15079 494 aa11.65□□□□□ -0.54
TSPAN8-205ENST00000550818 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
TSPAN8-205ENST00000550818 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
TSPAN8-205ENST00000550818 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
TSPAN8-205ENST00000550818 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
TSPAN8-205ENST00000550818 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
TSPAN8-205ENST00000550818 EMP3P54852 163 aa11.51□□□□□ -0.57
TSPAN8-205ENST00000550818 FKBP8Q14318 412 aa11.51□□□□□ -0.57
TSPAN8-205ENST00000550818 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
TSPAN8-205ENST00000550818 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
TSPAN8-205ENST00000550818 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
TSPAN8-205ENST00000550818 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
TSPAN8-205ENST00000550818 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
TSPAN8-205ENST00000550818 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
TSPAN8-205ENST00000550818 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
TSPAN8-205ENST00000550818 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
TSPAN8-205ENST00000550818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.58
TSPAN8-205ENST00000550818 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
TSPAN8-205ENST00000550818 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
TSPAN8-205ENST00000550818 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
TSPAN8-205ENST00000550818 PSEN1P49768 467 aa11.39□□□□□ -0.59
TSPAN8-205ENST00000550818 GSE1Q14687 1217 aa11.39□□□□□ -0.59
TSPAN8-205ENST00000550818 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
TSPAN8-205ENST00000550818 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
TSPAN8-205ENST00000550818 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
TSPAN8-205ENST00000550818 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
TSPAN8-205ENST00000550818 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
TSPAN8-205ENST00000550818 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
TSPAN8-205ENST00000550818 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
TSPAN8-205ENST00000550818 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
TSPAN8-205ENST00000550818 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
TSPAN8-205ENST00000550818 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
TSPAN8-205ENST00000550818 ERBB3P21860 1342 aa11.2□□□□□ -0.62
TSPAN8-205ENST00000550818 G3V3G9 751 aa11.2□□□□□ -0.62
TSPAN8-205ENST00000550818 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
TSPAN8-205ENST00000550818 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
TSPAN8-205ENST00000550818 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
TSPAN8-205ENST00000550818 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
TSPAN8-205ENST00000550818 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
TSPAN8-205ENST00000550818 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
TSPAN8-205ENST00000550818 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
TSPAN8-205ENST00000550818 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
TSPAN8-205ENST00000550818 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
TSPAN8-205ENST00000550818 RIMBP2O15034 1052 aa11.08□□□□□ -0.64
TSPAN8-205ENST00000550818 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
TSPAN8-205ENST00000550818 GPR153Q6NV75 609 aa11.05□□□□□ -0.64
TSPAN8-205ENST00000550818 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
TSPAN8-205ENST00000550818 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
TSPAN8-205ENST00000550818 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
TSPAN8-205ENST00000550818 PTGER2P43116 358 aa10.96□□□□□ -0.65
TSPAN8-205ENST00000550818 ARSIQ5FYB1 569 aa10.94□□□□□ -0.66
TSPAN8-205ENST00000550818 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms