RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 EVX2Q03828 476 aa15.25■□□□□ 0.03
LETMD1-226ENST00000550755 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
LETMD1-226ENST00000550755 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
LETMD1-226ENST00000550755 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-226ENST00000550755 CLCN6P51797 869 aa15.15■□□□□ 0.02
LETMD1-226ENST00000550755 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
LETMD1-226ENST00000550755 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
LETMD1-226ENST00000550755 PYGBP11216 843 aa15.09■□□□□ 0.01
LETMD1-226ENST00000550755 KIF12Q96FN5 646 aa15.06■□□□□ 0
LETMD1-226ENST00000550755 GABBR2O75899 941 aa15.03■□□□□ -0
LETMD1-226ENST00000550755 CHRM1P11229 460 aaPredicted RBP15.03■□□□□ -0
LETMD1-226ENST00000550755 MAP3K13O43283 966 aa15.02■□□□□ -0
LETMD1-226ENST00000550755 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
LETMD1-226ENST00000550755 PCDHB13Q9Y5F0 798 aa15.01□□□□□ -0.01
LETMD1-226ENST00000550755 ECM2O94769 699 aaPredicted RBP15□□□□□ -0.01
LETMD1-226ENST00000550755 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
LETMD1-226ENST00000550755 PKD2Q13563 968 aa14.98□□□□□ -0.01
LETMD1-226ENST00000550755 MS4A3Q96HJ5 214 aa14.96□□□□□ -0.01
LETMD1-226ENST00000550755 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
LETMD1-226ENST00000550755 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
LETMD1-226ENST00000550755 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
LETMD1-226ENST00000550755 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
LETMD1-226ENST00000550755 DCBLD2Q96PD2 775 aa14.87□□□□□ -0.03
LETMD1-226ENST00000550755 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
LETMD1-226ENST00000550755 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
LETMD1-226ENST00000550755 TAOK2Q9UL54 1235 aa14.84□□□□□ -0.03
LETMD1-226ENST00000550755 TIE1P35590 1138 aa14.79□□□□□ -0.04
LETMD1-226ENST00000550755 RGL2O15211 777 aa14.78□□□□□ -0.04
LETMD1-226ENST00000550755 PDAP1Q13442 181 aaKnown RBP14.78□□□□□ -0.04
LETMD1-226ENST00000550755 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
LETMD1-226ENST00000550755 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
LETMD1-226ENST00000550755 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
LETMD1-226ENST00000550755 PSEN1P49768 467 aa14.75□□□□□ -0.05
LETMD1-226ENST00000550755 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
LETMD1-226ENST00000550755 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
LETMD1-226ENST00000550755 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
LETMD1-226ENST00000550755 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
LETMD1-226ENST00000550755 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
LETMD1-226ENST00000550755 ATMINO43313 823 aaPredicted RBP14.69□□□□□ -0.06
LETMD1-226ENST00000550755 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
LETMD1-226ENST00000550755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-226ENST00000550755 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-226ENST00000550755 ZFP91Q96JP5 570 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-226ENST00000550755 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
LETMD1-226ENST00000550755 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
LETMD1-226ENST00000550755 STK25O00506 426 aa14.61□□□□□ -0.07
LETMD1-226ENST00000550755 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
LETMD1-226ENST00000550755 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
LETMD1-226ENST00000550755 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
LETMD1-226ENST00000550755 MKRN3Q13064 507 aaKnown RBP14.56□□□□□ -0.08
LETMD1-226ENST00000550755 SLC39A7Q92504 469 aa14.56□□□□□ -0.08
LETMD1-226ENST00000550755 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
LETMD1-226ENST00000550755 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
LETMD1-226ENST00000550755 C7P10643 843 aa14.53□□□□□ -0.08
LETMD1-226ENST00000550755 IER5LQ5T953 404 aa14.53□□□□□ -0.08
LETMD1-226ENST00000550755 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
LETMD1-226ENST00000550755 METRNQ9UJH8 293 aa14.5□□□□□ -0.09
LETMD1-226ENST00000550755 SEC24BO95487 1268 aa14.48□□□□□ -0.09
LETMD1-226ENST00000550755 EFCAB3Q8N7B9 438 aa14.46□□□□□ -0.09
LETMD1-226ENST00000550755 PLCG2P16885 1265 aa14.42□□□□□ -0.1
LETMD1-226ENST00000550755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
LETMD1-226ENST00000550755 SOX12O15370 315 aa14.41□□□□□ -0.1
LETMD1-226ENST00000550755 OCEL1Q9H607 264 aa14.4□□□□□ -0.1
LETMD1-226ENST00000550755 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
LETMD1-226ENST00000550755 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
LETMD1-226ENST00000550755 NLRP6P59044 892 aa14.34□□□□□ -0.11
LETMD1-226ENST00000550755 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
LETMD1-226ENST00000550755 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
LETMD1-226ENST00000550755 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
LETMD1-226ENST00000550755 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
LETMD1-226ENST00000550755 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
LETMD1-226ENST00000550755 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-226ENST00000550755 PDCD7Q8N8D1 485 aaKnown RBP14.28□□□□□ -0.12
LETMD1-226ENST00000550755 MFRPQ9BY79 579 aa14.27□□□□□ -0.13
LETMD1-226ENST00000550755 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-226ENST00000550755 G3V3G9 751 aa14.26□□□□□ -0.13
LETMD1-226ENST00000550755 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
LETMD1-226ENST00000550755 LHX8Q68G74 356 aa14.24□□□□□ -0.13
LETMD1-226ENST00000550755 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
LETMD1-226ENST00000550755 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
LETMD1-226ENST00000550755 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
LETMD1-226ENST00000550755 MAMSTRQ6ZN01 415 aa14.19□□□□□ -0.14
LETMD1-226ENST00000550755 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
LETMD1-226ENST00000550755 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
LETMD1-226ENST00000550755 BOLA1Q9Y3E2 137 aa14.16□□□□□ -0.14
LETMD1-226ENST00000550755 SCUBE2Q9NQ36 999 aa14.15□□□□□ -0.14
LETMD1-226ENST00000550755 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
LETMD1-226ENST00000550755 C3orf67Q6ZVT6 689 aa14.12□□□□□ -0.15
LETMD1-226ENST00000550755 SPRYD3Q8NCJ5 442 aa14.12□□□□□ -0.15
LETMD1-226ENST00000550755 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
LETMD1-226ENST00000550755 PAXIP1Q6ZW49 1069 aaPredicted RBP14.09□□□□□ -0.15
LETMD1-226ENST00000550755 MICALL2Q8IY33 904 aa14.08□□□□□ -0.16
LETMD1-226ENST00000550755 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
LETMD1-226ENST00000550755 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
LETMD1-226ENST00000550755 PPP1R37O75864 691 aa14.06□□□□□ -0.16
LETMD1-226ENST00000550755 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
LETMD1-226ENST00000550755 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
LETMD1-226ENST00000550755 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
LETMD1-226ENST00000550755 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
LETMD1-226ENST00000550755 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms