RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
PRDM4-206ENST00000550659 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
PRDM4-206ENST00000550659 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
PRDM4-206ENST00000550659 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
PRDM4-206ENST00000550659 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
PRDM4-206ENST00000550659 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
PRDM4-206ENST00000550659 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
PRDM4-206ENST00000550659 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
PRDM4-206ENST00000550659 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
PRDM4-206ENST00000550659 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
PRDM4-206ENST00000550659 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
PRDM4-206ENST00000550659 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
PRDM4-206ENST00000550659 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
PRDM4-206ENST00000550659 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
PRDM4-206ENST00000550659 NBR1Q14596 966 aa11.79□□□□□ -0.52
PRDM4-206ENST00000550659 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
PRDM4-206ENST00000550659 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
PRDM4-206ENST00000550659 STK25O00506 426 aa11.76□□□□□ -0.53
PRDM4-206ENST00000550659 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
PRDM4-206ENST00000550659 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
PRDM4-206ENST00000550659 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
PRDM4-206ENST00000550659 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
PRDM4-206ENST00000550659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
PRDM4-206ENST00000550659 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
PRDM4-206ENST00000550659 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
PRDM4-206ENST00000550659 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
PRDM4-206ENST00000550659 PYGBP11216 843 aa11.62□□□□□ -0.55
PRDM4-206ENST00000550659 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
PRDM4-206ENST00000550659 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
PRDM4-206ENST00000550659 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
PRDM4-206ENST00000550659 PDAP1Q13442 181 aaKnown RBP11.46□□□□□ -0.57
PRDM4-206ENST00000550659 TSPYL2Q9H2G4 693 aaPredicted RBP11.46□□□□□ -0.57
PRDM4-206ENST00000550659 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
PRDM4-206ENST00000550659 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
PRDM4-206ENST00000550659 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
PRDM4-206ENST00000550659 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
PRDM4-206ENST00000550659 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
PRDM4-206ENST00000550659 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
PRDM4-206ENST00000550659 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
PRDM4-206ENST00000550659 PCDHB13Q9Y5F0 798 aa11.38□□□□□ -0.59
PRDM4-206ENST00000550659 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
PRDM4-206ENST00000550659 PSEN1P49768 467 aa11.36□□□□□ -0.59
PRDM4-206ENST00000550659 KCNV2Q8TDN2 545 aa11.36□□□□□ -0.59
PRDM4-206ENST00000550659 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
PRDM4-206ENST00000550659 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
PRDM4-206ENST00000550659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRDM4-206ENST00000550659 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
PRDM4-206ENST00000550659 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
PRDM4-206ENST00000550659 SOX12O15370 315 aa11.25□□□□□ -0.61
PRDM4-206ENST00000550659 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRDM4-206ENST00000550659 NLRP6P59044 892 aa11.25□□□□□ -0.61
PRDM4-206ENST00000550659 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
PRDM4-206ENST00000550659 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
PRDM4-206ENST00000550659 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
PRDM4-206ENST00000550659 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
PRDM4-206ENST00000550659 PPP1R37O75864 691 aa11.23□□□□□ -0.61
PRDM4-206ENST00000550659 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
PRDM4-206ENST00000550659 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
PRDM4-206ENST00000550659 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
PRDM4-206ENST00000550659 MAP3K13O43283 966 aa11.21□□□□□ -0.61
PRDM4-206ENST00000550659 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
PRDM4-206ENST00000550659 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
PRDM4-206ENST00000550659 E2F4Q16254 413 aa11.19□□□□□ -0.62
PRDM4-206ENST00000550659 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
PRDM4-206ENST00000550659 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
PRDM4-206ENST00000550659 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
PRDM4-206ENST00000550659 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
PRDM4-206ENST00000550659 ABCC9O60706 1549 aa11.1□□□□□ -0.63
PRDM4-206ENST00000550659 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
PRDM4-206ENST00000550659 MFSD10Q14728 455 aa11.09□□□□□ -0.63
PRDM4-206ENST00000550659 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
PRDM4-206ENST00000550659 SEMA3EO15041 775 aa11.08□□□□□ -0.64
PRDM4-206ENST00000550659 PDE4AP27815 886 aa11.08□□□□□ -0.64
PRDM4-206ENST00000550659 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
PRDM4-206ENST00000550659 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
PRDM4-206ENST00000550659 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
PRDM4-206ENST00000550659 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
PRDM4-206ENST00000550659 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
PRDM4-206ENST00000550659 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
PRDM4-206ENST00000550659 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
PRDM4-206ENST00000550659 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
PRDM4-206ENST00000550659 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
PRDM4-206ENST00000550659 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
PRDM4-206ENST00000550659 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
PRDM4-206ENST00000550659 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
PRDM4-206ENST00000550659 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
PRDM4-206ENST00000550659 CAMK2BQ13554 666 aa11□□□□□ -0.65
PRDM4-206ENST00000550659 TMEM106CQ9BVX2 250 aa10.99□□□□□ -0.65
PRDM4-206ENST00000550659 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
PRDM4-206ENST00000550659 ZMYND10O75800 440 aa10.96□□□□□ -0.65
PRDM4-206ENST00000550659 MKRN3Q13064 507 aaKnown RBP10.96□□□□□ -0.65
PRDM4-206ENST00000550659 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
PRDM4-206ENST00000550659 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
PRDM4-206ENST00000550659 ILDR1Q86SU0 546 aaPredicted RBP10.91□□□□□ -0.66
PRDM4-206ENST00000550659 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
PRDM4-206ENST00000550659 BARGINQ6ZT62 677 aa10.9□□□□□ -0.66
PRDM4-206ENST00000550659 C14orf37Q86TY3 774 aa10.9□□□□□ -0.66
PRDM4-206ENST00000550659 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
PRDM4-206ENST00000550659 TIE1P35590 1138 aa10.89□□□□□ -0.67
PRDM4-206ENST00000550659 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms