RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 NUBP1P53384 320 aa11.38□□□□□ -0.59
RAB3IP-213ENST00000550647 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
RAB3IP-213ENST00000550647 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-213ENST00000550647 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-213ENST00000550647 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
RAB3IP-213ENST00000550647 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
RAB3IP-213ENST00000550647 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-213ENST00000550647 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
RAB3IP-213ENST00000550647 POTEHQ6S545 545 aa11.27□□□□□ -0.61
RAB3IP-213ENST00000550647 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
RAB3IP-213ENST00000550647 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
RAB3IP-213ENST00000550647 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
RAB3IP-213ENST00000550647 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
RAB3IP-213ENST00000550647 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
RAB3IP-213ENST00000550647 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
RAB3IP-213ENST00000550647 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
RAB3IP-213ENST00000550647 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-213ENST00000550647 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
RAB3IP-213ENST00000550647 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
RAB3IP-213ENST00000550647 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
RAB3IP-213ENST00000550647 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAB3IP-213ENST00000550647 NBR1Q14596 966 aa11.15□□□□□ -0.62
RAB3IP-213ENST00000550647 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
RAB3IP-213ENST00000550647 STK25O00506 426 aa11.13□□□□□ -0.63
RAB3IP-213ENST00000550647 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
RAB3IP-213ENST00000550647 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-213ENST00000550647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-213ENST00000550647 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-213ENST00000550647 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-213ENST00000550647 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-213ENST00000550647 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
RAB3IP-213ENST00000550647 PYGBP11216 843 aa10.99□□□□□ -0.65
RAB3IP-213ENST00000550647 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
RAB3IP-213ENST00000550647 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
RAB3IP-213ENST00000550647 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
RAB3IP-213ENST00000550647 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
RAB3IP-213ENST00000550647 HAX1O00165 279 aa10.87□□□□□ -0.67
RAB3IP-213ENST00000550647 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-213ENST00000550647 ZNF579Q8NAF0 562 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-213ENST00000550647 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
RAB3IP-213ENST00000550647 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
RAB3IP-213ENST00000550647 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-213ENST00000550647 KCNV2Q8TDN2 545 aa10.79□□□□□ -0.68
RAB3IP-213ENST00000550647 MFRPQ9BY79 579 aa10.79□□□□□ -0.68
RAB3IP-213ENST00000550647 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
RAB3IP-213ENST00000550647 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
RAB3IP-213ENST00000550647 PSEN1P49768 467 aa10.77□□□□□ -0.69
RAB3IP-213ENST00000550647 PCDHB8Q9UN66 801 aa10.77□□□□□ -0.69
RAB3IP-213ENST00000550647 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.69
RAB3IP-213ENST00000550647 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
RAB3IP-213ENST00000550647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAB3IP-213ENST00000550647 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-213ENST00000550647 SOX12O15370 315 aa10.71□□□□□ -0.69
RAB3IP-213ENST00000550647 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
RAB3IP-213ENST00000550647 ARHGEF1Q92888 912 aaKnown RBP10.71□□□□□ -0.69
RAB3IP-213ENST00000550647 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
RAB3IP-213ENST00000550647 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
RAB3IP-213ENST00000550647 NLRP6P59044 892 aa10.69□□□□□ -0.7
RAB3IP-213ENST00000550647 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
RAB3IP-213ENST00000550647 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
RAB3IP-213ENST00000550647 ERICH6Q7L0X2 663 aa10.66□□□□□ -0.7
RAB3IP-213ENST00000550647 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
RAB3IP-213ENST00000550647 PPP1R37O75864 691 aa10.65□□□□□ -0.7
RAB3IP-213ENST00000550647 EVX2Q03828 476 aa10.64□□□□□ -0.71
RAB3IP-213ENST00000550647 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
RAB3IP-213ENST00000550647 GTF3C3Q9Y5Q9 886 aa10.64□□□□□ -0.71
RAB3IP-213ENST00000550647 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-213ENST00000550647 CLCN6P51797 869 aa10.63□□□□□ -0.71
RAB3IP-213ENST00000550647 MAP3K13O43283 966 aa10.62□□□□□ -0.71
RAB3IP-213ENST00000550647 E2F4Q16254 413 aa10.62□□□□□ -0.71
RAB3IP-213ENST00000550647 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
RAB3IP-213ENST00000550647 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
RAB3IP-213ENST00000550647 TIMELESSQ9UNS1 1208 aa10.6□□□□□ -0.71
RAB3IP-213ENST00000550647 TESPA1A2RU30 521 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-213ENST00000550647 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
RAB3IP-213ENST00000550647 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-213ENST00000550647 MFSD10Q14728 455 aa10.58□□□□□ -0.72
RAB3IP-213ENST00000550647 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
RAB3IP-213ENST00000550647 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
RAB3IP-213ENST00000550647 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
RAB3IP-213ENST00000550647 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
RAB3IP-213ENST00000550647 PDE4AP27815 886 aa10.52□□□□□ -0.73
RAB3IP-213ENST00000550647 GABBR2O75899 941 aa10.51□□□□□ -0.73
RAB3IP-213ENST00000550647 SEMA3EO15041 775 aa10.5□□□□□ -0.73
RAB3IP-213ENST00000550647 BRPF1P55201 1214 aaPredicted RBP10.5□□□□□ -0.73
RAB3IP-213ENST00000550647 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
RAB3IP-213ENST00000550647 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
RAB3IP-213ENST00000550647 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
RAB3IP-213ENST00000550647 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
RAB3IP-213ENST00000550647 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
RAB3IP-213ENST00000550647 PHF12Q96QT6 1004 aa10.44□□□□□ -0.74
RAB3IP-213ENST00000550647 ZMYND10O75800 440 aa10.43□□□□□ -0.74
RAB3IP-213ENST00000550647 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
RAB3IP-213ENST00000550647 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
RAB3IP-213ENST00000550647 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
RAB3IP-213ENST00000550647 BARGINQ6ZT62 677 aa10.38□□□□□ -0.75
RAB3IP-213ENST00000550647 TIE1P35590 1138 aa10.37□□□□□ -0.75
RAB3IP-213ENST00000550647 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
RAB3IP-213ENST00000550647 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-213ENST00000550647 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms