RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SLC39A7Q92504 469 aa7.65□□□□□ -1.18
CCDC59-204ENST00000550589 METRNQ9UJH8 293 aa7.63□□□□□ -1.19
CCDC59-204ENST00000550589 ZCCHC6Q5VYS8 1495 aaKnown RBP7.62□□□□□ -1.19
CCDC59-204ENST00000550589 GALR2O43603 387 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-204ENST00000550589 PRR29P0C7W0 189 aa7.56□□□□□ -1.2
CCDC59-204ENST00000550589 ZRANB1Q9UGI0 708 aa7.56□□□□□ -1.2
CCDC59-204ENST00000550589 FARP1Q9Y4F1 1045 aaPredicted RBP7.55□□□□□ -1.2
CCDC59-204ENST00000550589 POTEJP0CG39 1038 aa7.54□□□□□ -1.2
CCDC59-204ENST00000550589 SHROOM4Q9ULL8 1493 aa7.53□□□□□ -1.2
CCDC59-204ENST00000550589 DCAF8L2P0C7V8 631 aa7.51□□□□□ -1.21
CCDC59-204ENST00000550589 STAG3Q9UJ98 1225 aa7.51□□□□□ -1.21
CCDC59-204ENST00000550589 DCAF1Q9Y4B6 1507 aa7.49□□□□□ -1.21
CCDC59-204ENST00000550589 CREBZFQ9NS37 354 aa7.48□□□□□ -1.21
CCDC59-204ENST00000550589 PELP1Q8IZL8 1130 aaKnown RBP7.46□□□□□ -1.21
CCDC59-204ENST00000550589 TMEM121BQ9BXQ6 578 aaPredicted RBP7.46□□□□□ -1.21
CCDC59-204ENST00000550589 ST18O60284 1047 aa7.45□□□□□ -1.22
CCDC59-204ENST00000550589 SUPT5HO00267 1087 aaKnown RBP7.43□□□□□ -1.22
CCDC59-204ENST00000550589 MNX1P50219 401 aaPredicted RBP7.43□□□□□ -1.22
CCDC59-204ENST00000550589 PAK3O75914 559 aaPredicted RBP7.42□□□□□ -1.22
CCDC59-204ENST00000550589 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
CCDC59-204ENST00000550589 FBXO3Q9UK99 471 aa7.37□□□□□ -1.23
CCDC59-204ENST00000550589 MIER1Q8N108 512 aa7.36□□□□□ -1.23
CCDC59-204ENST00000550589 ATMINO43313 823 aaPredicted RBP7.34□□□□□ -1.23
CCDC59-204ENST00000550589 VASPP50552 380 aaPredicted RBP7.34□□□□□ -1.23
CCDC59-204ENST00000550589 MYO15BQ96JP2 1530 aa7.34□□□□□ -1.23
CCDC59-204ENST00000550589 PLCD3Q8N3E9 789 aa7.31□□□□□ -1.24
CCDC59-204ENST00000550589 SNPHO15079 494 aa7.3□□□□□ -1.24
CCDC59-204ENST00000550589 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
CCDC59-204ENST00000550589 NUBP1P53384 320 aa7.25□□□□□ -1.25
CCDC59-204ENST00000550589 RNF166Q96A37 237 aaPredicted RBP7.25□□□□□ -1.25
CCDC59-204ENST00000550589 SLAIN1Q8ND83 568 aa7.25□□□□□ -1.25
CCDC59-204ENST00000550589 NPM1P06748 294 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC59-204ENST00000550589 RASEFQ8IZ41 740 aa7.24□□□□□ -1.25
CCDC59-204ENST00000550589 PLEKHG5O94827 1062 aa7.22□□□□□ -1.25
CCDC59-204ENST00000550589 NACADO15069 1562 aa7.22□□□□□ -1.25
CCDC59-204ENST00000550589 PHF12Q96QT6 1004 aa7.21□□□□□ -1.25
CCDC59-204ENST00000550589 ZBTB47Q9UFB7 747 aaPredicted RBP7.19□□□□□ -1.26
CCDC59-204ENST00000550589 KLHL34Q8N239 644 aa7.19□□□□□ -1.26
CCDC59-204ENST00000550589 TSPYL2Q9H2G4 693 aaPredicted RBP7.18□□□□□ -1.26
CCDC59-204ENST00000550589 CCDC61Q9Y6R9 512 aa7.17□□□□□ -1.26
CCDC59-204ENST00000550589 SEC24BO95487 1268 aa7.16□□□□□ -1.26
CCDC59-204ENST00000550589 ABCC9O60706 1549 aa7.15□□□□□ -1.26
CCDC59-204ENST00000550589 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
CCDC59-204ENST00000550589 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.26
CCDC59-204ENST00000550589 SPOCK2Q92563 424 aa7.15□□□□□ -1.27
CCDC59-204ENST00000550589 SCRIBQ14160 1630 aa7.14□□□□□ -1.27
CCDC59-204ENST00000550589 EMP3P54852 163 aa7.12□□□□□ -1.27
CCDC59-204ENST00000550589 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
CCDC59-204ENST00000550589 MARVELD3Q96A59 401 aa7.11□□□□□ -1.27
CCDC59-204ENST00000550589 MS4A3Q96HJ5 214 aa7.11□□□□□ -1.27
CCDC59-204ENST00000550589 KIF12Q96FN5 646 aa7.1□□□□□ -1.27
CCDC59-204ENST00000550589 RB1CC1Q8TDY2 1594 aa7.1□□□□□ -1.27
CCDC59-204ENST00000550589 DCAF8Q5TAQ9 597 aa7.1□□□□□ -1.27
CCDC59-204ENST00000550589 FAM212AQ96EL1 285 aa7.1□□□□□ -1.27
CCDC59-204ENST00000550589 RSF1Q96T23 1441 aaPredicted RBP7.1□□□□□ -1.27
CCDC59-204ENST00000550589 POTEFA5A3E0 1075 aa7.09□□□□□ -1.27
CCDC59-204ENST00000550589 MAP3K13O43283 966 aa7.07□□□□□ -1.28
CCDC59-204ENST00000550589 MYT1LQ9UL68 1186 aa7.07□□□□□ -1.28
CCDC59-204ENST00000550589 PYGBP11216 843 aa7.06□□□□□ -1.28
CCDC59-204ENST00000550589 GSE1Q14687 1217 aa7.05□□□□□ -1.28
CCDC59-204ENST00000550589 TRPC6Q9Y210 931 aa7.05□□□□□ -1.28
CCDC59-204ENST00000550589 HS3ST6Q96QI5 342 aa7.04□□□□□ -1.28
CCDC59-204ENST00000550589 PTGER2P43116 358 aa7.04□□□□□ -1.28
CCDC59-204ENST00000550589 CIZ1Q9ULV3 898 aaPredicted RBP7.04□□□□□ -1.28
CCDC59-204ENST00000550589 CHRM1P11229 460 aaPredicted RBP7.03□□□□□ -1.28
CCDC59-204ENST00000550589 PKD2Q13563 968 aa7.02□□□□□ -1.29
CCDC59-204ENST00000550589 IFNL1Q8IU54 200 aa7.02□□□□□ -1.29
CCDC59-204ENST00000550589 TRIM41Q8WV44 630 aa7.01□□□□□ -1.29
CCDC59-204ENST00000550589 PCDHB13Q9Y5F0 798 aa7□□□□□ -1.29
CCDC59-204ENST00000550589 SGIP1Q9BQI5 828 aa7□□□□□ -1.29
CCDC59-204ENST00000550589 PCDHB8Q9UN66 801 aa7□□□□□ -1.29
CCDC59-204ENST00000550589 IER5LQ5T953 404 aa6.99□□□□□ -1.29
CCDC59-204ENST00000550589 BAZ1AQ9NRL2 1556 aaPredicted RBP6.98□□□□□ -1.29
CCDC59-204ENST00000550589 RNF25Q96BH1 459 aaPredicted RBP6.98□□□□□ -1.29
CCDC59-204ENST00000550589 FAM205CA6NFA0 338 aa6.97□□□□□ -1.29
CCDC59-204ENST00000550589 CECR2Q9BXF3 1484 aa6.96□□□□□ -1.3
CCDC59-204ENST00000550589 BMP2KQ9NSY1 1161 aaPredicted RBP6.96□□□□□ -1.3
CCDC59-204ENST00000550589 TIE1P35590 1138 aa6.95□□□□□ -1.3
CCDC59-204ENST00000550589 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
CCDC59-204ENST00000550589 MROH2BQ7Z745 1585 aa6.95□□□□□ -1.3
CCDC59-204ENST00000550589 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
CCDC59-204ENST00000550589 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
CCDC59-204ENST00000550589 TTLL13PA6NNM8 815 aa6.93□□□□□ -1.3
CCDC59-204ENST00000550589 LOC105371045A0A1W2PR82 267 aa6.91□□□□□ -1.3
CCDC59-204ENST00000550589 RGL2O15211 777 aa6.91□□□□□ -1.3
CCDC59-204ENST00000550589 RGS20O76081 388 aa6.91□□□□□ -1.3
CCDC59-204ENST00000550589 ECM2O94769 699 aaPredicted RBP6.91□□□□□ -1.3
CCDC59-204ENST00000550589 ZNF467Q7Z7K2 595 aaPredicted RBP6.91□□□□□ -1.3
CCDC59-204ENST00000550589 TMEM106CQ9BVX2 250 aa6.89□□□□□ -1.31
CCDC59-204ENST00000550589 PCGF6Q9BYE7 350 aa6.89□□□□□ -1.31
CCDC59-204ENST00000550589 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.89□□□□□ -1.31
CCDC59-204ENST00000550589 PSEN1P49768 467 aa6.88□□□□□ -1.31
CCDC59-204ENST00000550589 RIOK3O14730 519 aaKnown RBP6.88□□□□□ -1.31
CCDC59-204ENST00000550589 WIZO95785 1651 aa6.87□□□□□ -1.31
CCDC59-204ENST00000550589 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
CCDC59-204ENST00000550589 TOP2AP11388 1531 aaKnown RBP6.87□□□□□ -1.31
CCDC59-204ENST00000550589 PDAP1Q13442 181 aaKnown RBP6.86□□□□□ -1.31
CCDC59-204ENST00000550589 TRIM35Q9UPQ4 493 aa6.86□□□□□ -1.31
CCDC59-204ENST00000550589 SMARCA4P51532 1647 aa6.86□□□□□ -1.31
CCDC59-204ENST00000550589 RTN4Q9NQC3 1192 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms