RNA–Protein interactions for RNA: ENST00000549738.5

GNPTAB-205, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 4

Gene GNPTAB, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-205ENST00000549738 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
GNPTAB-205ENST00000549738 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
GNPTAB-205ENST00000549738 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
GNPTAB-205ENST00000549738 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
GNPTAB-205ENST00000549738 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
GNPTAB-205ENST00000549738 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
GNPTAB-205ENST00000549738 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
GNPTAB-205ENST00000549738 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
GNPTAB-205ENST00000549738 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
GNPTAB-205ENST00000549738 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
GNPTAB-205ENST00000549738 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
GNPTAB-205ENST00000549738 FXR2P51116 673 aaKnown RBP eCLIP10.07□□□□□ -0.8
GNPTAB-205ENST00000549738 FARP1Q9Y4F1 1045 aaPredicted RBP10.07□□□□□ -0.8
GNPTAB-205ENST00000549738 TAOK2Q9UL54 1235 aa10.06□□□□□ -0.8
GNPTAB-205ENST00000549738 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
GNPTAB-205ENST00000549738 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
GNPTAB-205ENST00000549738 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
GNPTAB-205ENST00000549738 PYGBP11216 843 aa10.02□□□□□ -0.81
GNPTAB-205ENST00000549738 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
GNPTAB-205ENST00000549738 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
GNPTAB-205ENST00000549738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-205ENST00000549738 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-205ENST00000549738 STK25O00506 426 aa9.96□□□□□ -0.82
GNPTAB-205ENST00000549738 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
GNPTAB-205ENST00000549738 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
GNPTAB-205ENST00000549738 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
GNPTAB-205ENST00000549738 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
GNPTAB-205ENST00000549738 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
GNPTAB-205ENST00000549738 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
GNPTAB-205ENST00000549738 ZNF467Q7Z7K2 595 aaPredicted RBP9.92□□□□□ -0.82
GNPTAB-205ENST00000549738 BCANQ96GW7 911 aa9.9□□□□□ -0.82
GNPTAB-205ENST00000549738 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
GNPTAB-205ENST00000549738 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
GNPTAB-205ENST00000549738 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
GNPTAB-205ENST00000549738 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
GNPTAB-205ENST00000549738 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
GNPTAB-205ENST00000549738 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
GNPTAB-205ENST00000549738 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
GNPTAB-205ENST00000549738 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
GNPTAB-205ENST00000549738 PSEN1P49768 467 aa9.8□□□□□ -0.84
GNPTAB-205ENST00000549738 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
GNPTAB-205ENST00000549738 MAP3K13O43283 966 aa9.79□□□□□ -0.84
GNPTAB-205ENST00000549738 MFRPQ9BY79 579 aa9.75□□□□□ -0.85
GNPTAB-205ENST00000549738 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
GNPTAB-205ENST00000549738 ZRANB1Q9UGI0 708 aa9.73□□□□□ -0.85
GNPTAB-205ENST00000549738 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
GNPTAB-205ENST00000549738 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
GNPTAB-205ENST00000549738 PHF12Q96QT6 1004 aa9.7□□□□□ -0.86
GNPTAB-205ENST00000549738 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
GNPTAB-205ENST00000549738 SOX12O15370 315 aa9.67□□□□□ -0.86
GNPTAB-205ENST00000549738 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
GNPTAB-205ENST00000549738 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
GNPTAB-205ENST00000549738 PPP1R37O75864 691 aa9.63□□□□□ -0.87
GNPTAB-205ENST00000549738 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
GNPTAB-205ENST00000549738 NLRP6P59044 892 aa9.63□□□□□ -0.87
GNPTAB-205ENST00000549738 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
GNPTAB-205ENST00000549738 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
GNPTAB-205ENST00000549738 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
GNPTAB-205ENST00000549738 NBR1Q14596 966 aa9.59□□□□□ -0.87
GNPTAB-205ENST00000549738 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
GNPTAB-205ENST00000549738 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
GNPTAB-205ENST00000549738 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
GNPTAB-205ENST00000549738 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
GNPTAB-205ENST00000549738 TIE1P35590 1138 aa9.55□□□□□ -0.88
GNPTAB-205ENST00000549738 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
GNPTAB-205ENST00000549738 TTLL13PA6NNM8 815 aa9.52□□□□□ -0.89
GNPTAB-205ENST00000549738 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
GNPTAB-205ENST00000549738 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
GNPTAB-205ENST00000549738 GALR2O43603 387 aaPredicted RBP9.49□□□□□ -0.89
GNPTAB-205ENST00000549738 CLCN6P51797 869 aa9.49□□□□□ -0.89
GNPTAB-205ENST00000549738 EVX2Q03828 476 aa9.49□□□□□ -0.89
GNPTAB-205ENST00000549738 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
GNPTAB-205ENST00000549738 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
GNPTAB-205ENST00000549738 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
GNPTAB-205ENST00000549738 MKRN3Q13064 507 aaKnown RBP9.47□□□□□ -0.89
GNPTAB-205ENST00000549738 MFSD10Q14728 455 aa9.46□□□□□ -0.9
GNPTAB-205ENST00000549738 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
GNPTAB-205ENST00000549738 HAX1O00165 279 aa9.43□□□□□ -0.9
GNPTAB-205ENST00000549738 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
GNPTAB-205ENST00000549738 E2F4Q16254 413 aa9.42□□□□□ -0.9
GNPTAB-205ENST00000549738 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
GNPTAB-205ENST00000549738 PDE4AP27815 886 aa9.41□□□□□ -0.9
GNPTAB-205ENST00000549738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.41□□□□□ -0.9
GNPTAB-205ENST00000549738 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
GNPTAB-205ENST00000549738 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
GNPTAB-205ENST00000549738 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
GNPTAB-205ENST00000549738 ATN1P54259 1190 aaPredicted RBP9.38□□□□□ -0.91
GNPTAB-205ENST00000549738 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
GNPTAB-205ENST00000549738 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
GNPTAB-205ENST00000549738 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
GNPTAB-205ENST00000549738 IRX5P78411 483 aaPredicted RBP9.36□□□□□ -0.91
GNPTAB-205ENST00000549738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
GNPTAB-205ENST00000549738 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
GNPTAB-205ENST00000549738 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
GNPTAB-205ENST00000549738 IER5LQ5T953 404 aa9.34□□□□□ -0.91
GNPTAB-205ENST00000549738 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
GNPTAB-205ENST00000549738 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
GNPTAB-205ENST00000549738 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
GNPTAB-205ENST00000549738 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
GNPTAB-205ENST00000549738 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms