RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 PELP1Q8IZL8 1130 aaKnown RBP10.04□□□□□ -0.8
USP25-210ENST00000549362 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
USP25-210ENST00000549362 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
USP25-210ENST00000549362 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
USP25-210ENST00000549362 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
USP25-210ENST00000549362 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
USP25-210ENST00000549362 POTEJP0CG39 1038 aa9.95□□□□□ -0.82
USP25-210ENST00000549362 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
USP25-210ENST00000549362 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
USP25-210ENST00000549362 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
USP25-210ENST00000549362 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
USP25-210ENST00000549362 SEC24BO95487 1268 aa9.73□□□□□ -0.85
USP25-210ENST00000549362 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
USP25-210ENST00000549362 MMRN1Q13201 1228 aa9.7□□□□□ -0.86
USP25-210ENST00000549362 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
USP25-210ENST00000549362 TIE1P35590 1138 aa9.69□□□□□ -0.86
USP25-210ENST00000549362 BMP2KQ9NSY1 1161 aaPredicted RBP9.69□□□□□ -0.86
USP25-210ENST00000549362 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
USP25-210ENST00000549362 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
USP25-210ENST00000549362 ST18O60284 1047 aa9.66□□□□□ -0.86
USP25-210ENST00000549362 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
USP25-210ENST00000549362 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
USP25-210ENST00000549362 FKBP8Q14318 412 aa9.64□□□□□ -0.87
USP25-210ENST00000549362 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
USP25-210ENST00000549362 IER5LQ5T953 404 aa9.62□□□□□ -0.87
USP25-210ENST00000549362 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
USP25-210ENST00000549362 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
USP25-210ENST00000549362 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
USP25-210ENST00000549362 MAP3K13O43283 966 aa9.56□□□□□ -0.88
USP25-210ENST00000549362 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
USP25-210ENST00000549362 SNPHO15079 494 aa9.54□□□□□ -0.88
USP25-210ENST00000549362 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
USP25-210ENST00000549362 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
USP25-210ENST00000549362 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
USP25-210ENST00000549362 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
USP25-210ENST00000549362 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
USP25-210ENST00000549362 PLCG2P16885 1265 aa9.47□□□□□ -0.89
USP25-210ENST00000549362 PCDHB13Q9Y5F0 798 aa9.42□□□□□ -0.9
USP25-210ENST00000549362 MARVELD3Q96A59 401 aa9.4□□□□□ -0.9
USP25-210ENST00000549362 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
USP25-210ENST00000549362 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
USP25-210ENST00000549362 EMP3P54852 163 aa9.35□□□□□ -0.91
USP25-210ENST00000549362 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
USP25-210ENST00000549362 TMEM106CQ9BVX2 250 aa9.35□□□□□ -0.91
USP25-210ENST00000549362 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
USP25-210ENST00000549362 MIER1Q8N108 512 aa9.33□□□□□ -0.92
USP25-210ENST00000549362 OCEL1Q9H607 264 aa9.33□□□□□ -0.92
USP25-210ENST00000549362 IFNL1Q8IU54 200 aa9.3□□□□□ -0.92
USP25-210ENST00000549362 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
USP25-210ENST00000549362 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
USP25-210ENST00000549362 KRTAP3-2Q9BYR7 98 aa9.28□□□□□ -0.92
USP25-210ENST00000549362 PROM2Q8N271 834 aa9.27□□□□□ -0.93
USP25-210ENST00000549362 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
USP25-210ENST00000549362 ZBTB47Q9UFB7 747 aaPredicted RBP9.25□□□□□ -0.93
USP25-210ENST00000549362 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
USP25-210ENST00000549362 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
USP25-210ENST00000549362 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
USP25-210ENST00000549362 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
USP25-210ENST00000549362 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
USP25-210ENST00000549362 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
USP25-210ENST00000549362 POTEB3A0JP26 581 aa9.17□□□□□ -0.94
USP25-210ENST00000549362 POTEBQ6S5H4 581 aa9.17□□□□□ -0.94
USP25-210ENST00000549362 NUBP1P53384 320 aa9.14□□□□□ -0.95
USP25-210ENST00000549362 GOLGA2Q08379 1002 aa9.1□□□□□ -0.95
USP25-210ENST00000549362 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
USP25-210ENST00000549362 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
USP25-210ENST00000549362 PDCD7Q8N8D1 485 aaKnown RBP9.07□□□□□ -0.96
USP25-210ENST00000549362 ERBB3P21860 1342 aa9.05□□□□□ -0.96
USP25-210ENST00000549362 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
USP25-210ENST00000549362 PTGER2P43116 358 aa9.03□□□□□ -0.96
USP25-210ENST00000549362 HOXB1P14653 301 aaPredicted RBP9.02□□□□□ -0.97
USP25-210ENST00000549362 PYGBP11216 843 aa9.01□□□□□ -0.97
USP25-210ENST00000549362 G3V3G9 751 aa9□□□□□ -0.97
USP25-210ENST00000549362 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
USP25-210ENST00000549362 DCAF8Q5TAQ9 597 aa9□□□□□ -0.97
USP25-210ENST00000549362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9□□□□□ -0.974e-7■■■□□ 15.9
USP25-210ENST00000549362 PCDHB8Q9UN66 801 aa9□□□□□ -0.97
USP25-210ENST00000549362 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
USP25-210ENST00000549362 RIMBP2O15034 1052 aa8.97□□□□□ -0.97
USP25-210ENST00000549362 HOXB3P14651 431 aaPredicted RBP8.96□□□□□ -0.98
USP25-210ENST00000549362 ZNF467Q7Z7K2 595 aaPredicted RBP8.96□□□□□ -0.98
USP25-210ENST00000549362 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
USP25-210ENST00000549362 VARS2Q5ST30 1063 aaKnown RBP8.93□□□□□ -0.98
USP25-210ENST00000549362 ZNF687Q8N1G0 1237 aa8.91□□□□□ -0.98
USP25-210ENST00000549362 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
USP25-210ENST00000549362 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
USP25-210ENST00000549362 ILDR1Q86SU0 546 aaPredicted RBP8.86□□□□□ -0.99
USP25-210ENST00000549362 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
USP25-210ENST00000549362 ZSWIM6Q9HCJ5 1215 aa8.86□□□□□ -0.99
USP25-210ENST00000549362 PSEN1P49768 467 aa8.83□□□□□ -1
USP25-210ENST00000549362 GSE1Q14687 1217 aa8.83□□□□□ -1
USP25-210ENST00000549362 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
USP25-210ENST00000549362 DPY19L2Q6NUT2 758 aa8.81□□□□□ -1
USP25-210ENST00000549362 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
USP25-210ENST00000549362 PLCB2Q00722 1185 aa8.79□□□□□ -1
USP25-210ENST00000549362 SPOCK2Q92563 424 aa8.78□□□□□ -1
USP25-210ENST00000549362 CHRM1P11229 460 aaPredicted RBP8.77□□□□□ -1.01
USP25-210ENST00000549362 HAP1P54257 671 aaPredicted RBP8.75□□□□□ -1.01
USP25-210ENST00000549362 PDAP1Q13442 181 aaKnown RBP8.75□□□□□ -1.01
USP25-210ENST00000549362 PKD2Q13563 968 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms