RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
USP15-213ENST00000549268 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
USP15-213ENST00000549268 GSE1Q14687 1217 aa14.48□□□□□ -0.09
USP15-213ENST00000549268 DCAF8Q5TAQ9 597 aa14.46□□□□□ -0.09
USP15-213ENST00000549268 GABBR2O75899 941 aa14.45□□□□□ -0.1
USP15-213ENST00000549268 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
USP15-213ENST00000549268 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
USP15-213ENST00000549268 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
USP15-213ENST00000549268 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
USP15-213ENST00000549268 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
USP15-213ENST00000549268 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
USP15-213ENST00000549268 MAP3K13O43283 966 aa14.31□□□□□ -0.12
USP15-213ENST00000549268 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
USP15-213ENST00000549268 PYGBP11216 843 aa14.28□□□□□ -0.12
USP15-213ENST00000549268 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
USP15-213ENST00000549268 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
USP15-213ENST00000549268 IFNL1Q8IU54 200 aa14.19□□□□□ -0.14
USP15-213ENST00000549268 ZNF467Q7Z7K2 595 aaPredicted RBP14.18□□□□□ -0.14
USP15-213ENST00000549268 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
USP15-213ENST00000549268 PKD2Q13563 968 aa14.16□□□□□ -0.14
USP15-213ENST00000549268 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
USP15-213ENST00000549268 TIE1P35590 1138 aa14.14□□□□□ -0.15
USP15-213ENST00000549268 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
USP15-213ENST00000549268 PCDHB8Q9UN66 801 aa14.1□□□□□ -0.15
USP15-213ENST00000549268 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
USP15-213ENST00000549268 ATMINO43313 823 aaPredicted RBP14.08□□□□□ -0.16
USP15-213ENST00000549268 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
USP15-213ENST00000549268 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
USP15-213ENST00000549268 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
USP15-213ENST00000549268 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
USP15-213ENST00000549268 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
USP15-213ENST00000549268 PDAP1Q13442 181 aaKnown RBP14.02□□□□□ -0.17
USP15-213ENST00000549268 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
USP15-213ENST00000549268 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
USP15-213ENST00000549268 PSEN1P49768 467 aa13.99□□□□□ -0.17
USP15-213ENST00000549268 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
USP15-213ENST00000549268 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
USP15-213ENST00000549268 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
USP15-213ENST00000549268 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
USP15-213ENST00000549268 SLC39A7Q92504 469 aa13.95□□□□□ -0.18
USP15-213ENST00000549268 RGL2O15211 777 aa13.93□□□□□ -0.18
USP15-213ENST00000549268 C7P10643 843 aa13.93□□□□□ -0.18
USP15-213ENST00000549268 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
USP15-213ENST00000549268 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
USP15-213ENST00000549268 IER5LQ5T953 404 aa13.91□□□□□ -0.18
USP15-213ENST00000549268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
USP15-213ENST00000549268 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
USP15-213ENST00000549268 METRNQ9UJH8 293 aa13.86□□□□□ -0.19
USP15-213ENST00000549268 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
USP15-213ENST00000549268 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
USP15-213ENST00000549268 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
USP15-213ENST00000549268 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
USP15-213ENST00000549268 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
USP15-213ENST00000549268 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
USP15-213ENST00000549268 SEC24BO95487 1268 aa13.75□□□□□ -0.21
USP15-213ENST00000549268 STK25O00506 426 aa13.74□□□□□ -0.21
USP15-213ENST00000549268 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
USP15-213ENST00000549268 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
USP15-213ENST00000549268 LHX8Q68G74 356 aa13.73□□□□□ -0.21
USP15-213ENST00000549268 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
USP15-213ENST00000549268 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
USP15-213ENST00000549268 PLCG2P16885 1265 aa13.71□□□□□ -0.21
USP15-213ENST00000549268 SOX12O15370 315 aa13.7□□□□□ -0.22
USP15-213ENST00000549268 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
USP15-213ENST00000549268 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
USP15-213ENST00000549268 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
USP15-213ENST00000549268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.229e-8■■■■□ 22.4
USP15-213ENST00000549268 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
USP15-213ENST00000549268 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
USP15-213ENST00000549268 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
USP15-213ENST00000549268 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
USP15-213ENST00000549268 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
USP15-213ENST00000549268 NLRP6P59044 892 aa13.58□□□□□ -0.24
USP15-213ENST00000549268 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
USP15-213ENST00000549268 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
USP15-213ENST00000549268 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
USP15-213ENST00000549268 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
USP15-213ENST00000549268 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
USP15-213ENST00000549268 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
USP15-213ENST00000549268 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
USP15-213ENST00000549268 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
USP15-213ENST00000549268 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
USP15-213ENST00000549268 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
USP15-213ENST00000549268 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
USP15-213ENST00000549268 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
USP15-213ENST00000549268 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
USP15-213ENST00000549268 G3V3G9 751 aa13.43□□□□□ -0.26
USP15-213ENST00000549268 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
USP15-213ENST00000549268 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
USP15-213ENST00000549268 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
USP15-213ENST00000549268 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
USP15-213ENST00000549268 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
USP15-213ENST00000549268 PPP1R37O75864 691 aa13.32□□□□□ -0.28
USP15-213ENST00000549268 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
USP15-213ENST00000549268 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
USP15-213ENST00000549268 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
USP15-213ENST00000549268 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
USP15-213ENST00000549268 SNPHO15079 494 aa13.18□□□□□ -0.3
USP15-213ENST00000549268 KIF3CO14782 793 aa13.17□□□□□ -0.3
USP15-213ENST00000549268 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms