RNA–Protein interactions for RNA: ENST00000549237.5

USP15-212, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-212ENST00000549237 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
USP15-212ENST00000549237 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
USP15-212ENST00000549237 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
USP15-212ENST00000549237 PROM2Q8N271 834 aa12.77□□□□□ -0.37
USP15-212ENST00000549237 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
USP15-212ENST00000549237 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
USP15-212ENST00000549237 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
USP15-212ENST00000549237 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
USP15-212ENST00000549237 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
USP15-212ENST00000549237 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
USP15-212ENST00000549237 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
USP15-212ENST00000549237 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
USP15-212ENST00000549237 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
USP15-212ENST00000549237 MIER1Q8N108 512 aa12.58□□□□□ -0.4
USP15-212ENST00000549237 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
USP15-212ENST00000549237 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
USP15-212ENST00000549237 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
USP15-212ENST00000549237 C7P10643 843 aa12.54□□□□□ -0.4
USP15-212ENST00000549237 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
USP15-212ENST00000549237 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
USP15-212ENST00000549237 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
USP15-212ENST00000549237 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
USP15-212ENST00000549237 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
USP15-212ENST00000549237 PLSCR2Q9NRY7 297 aa12.45□□□□□ -0.42
USP15-212ENST00000549237 MAP3K13O43283 966 aa12.44□□□□□ -0.42
USP15-212ENST00000549237 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
USP15-212ENST00000549237 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
USP15-212ENST00000549237 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
USP15-212ENST00000549237 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
USP15-212ENST00000549237 TIE1P35590 1138 aa12.41□□□□□ -0.42
USP15-212ENST00000549237 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
USP15-212ENST00000549237 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
USP15-212ENST00000549237 POTEMA6NI47 508 aa12.38□□□□□ -0.43
USP15-212ENST00000549237 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
USP15-212ENST00000549237 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
USP15-212ENST00000549237 FKBP8Q14318 412 aa12.34□□□□□ -0.43
USP15-212ENST00000549237 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
USP15-212ENST00000549237 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
USP15-212ENST00000549237 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
USP15-212ENST00000549237 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
USP15-212ENST00000549237 NUBP1P53384 320 aa12.31□□□□□ -0.44
USP15-212ENST00000549237 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
USP15-212ENST00000549237 SEC24BO95487 1268 aa12.3□□□□□ -0.44
USP15-212ENST00000549237 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
USP15-212ENST00000549237 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
USP15-212ENST00000549237 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
USP15-212ENST00000549237 IER5LQ5T953 404 aa12.25□□□□□ -0.45
USP15-212ENST00000549237 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
USP15-212ENST00000549237 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
USP15-212ENST00000549237 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
USP15-212ENST00000549237 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
USP15-212ENST00000549237 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
USP15-212ENST00000549237 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
USP15-212ENST00000549237 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
USP15-212ENST00000549237 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
USP15-212ENST00000549237 DCAF8Q5TAQ9 597 aa12.14□□□□□ -0.47
USP15-212ENST00000549237 PLCG2P16885 1265 aa12.12□□□□□ -0.47
USP15-212ENST00000549237 PYGBP11216 843 aa12.1□□□□□ -0.47
USP15-212ENST00000549237 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
USP15-212ENST00000549237 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
USP15-212ENST00000549237 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
USP15-212ENST00000549237 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
USP15-212ENST00000549237 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
USP15-212ENST00000549237 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
USP15-212ENST00000549237 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
USP15-212ENST00000549237 PEG3Q9GZU2 1588 aa12.04□□□□□ -0.48
USP15-212ENST00000549237 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
USP15-212ENST00000549237 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
USP15-212ENST00000549237 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
USP15-212ENST00000549237 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
USP15-212ENST00000549237 OCEL1Q9H607 264 aa12□□□□□ -0.49
USP15-212ENST00000549237 GSE1Q14687 1217 aa11.99□□□□□ -0.49
USP15-212ENST00000549237 WIZO95785 1651 aa11.97□□□□□ -0.49
USP15-212ENST00000549237 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
USP15-212ENST00000549237 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
USP15-212ENST00000549237 ST18O60284 1047 aa11.93□□□□□ -0.5
USP15-212ENST00000549237 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
USP15-212ENST00000549237 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
USP15-212ENST00000549237 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
USP15-212ENST00000549237 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
USP15-212ENST00000549237 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
USP15-212ENST00000549237 NESP48681 1621 aa11.87□□□□□ -0.51
USP15-212ENST00000549237 SNPHO15079 494 aa11.87□□□□□ -0.51
USP15-212ENST00000549237 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
USP15-212ENST00000549237 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
USP15-212ENST00000549237 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
USP15-212ENST00000549237 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
USP15-212ENST00000549237 PSEN1P49768 467 aa11.83□□□□□ -0.52
USP15-212ENST00000549237 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
USP15-212ENST00000549237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.521e-8■■■■□ 20.9
USP15-212ENST00000549237 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
USP15-212ENST00000549237 TOP2AP11388 1531 aaKnown RBP11.78□□□□□ -0.52
USP15-212ENST00000549237 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
USP15-212ENST00000549237 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
USP15-212ENST00000549237 LAMC3Q9Y6N6 1575 aa11.76□□□□□ -0.53
USP15-212ENST00000549237 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
USP15-212ENST00000549237 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
USP15-212ENST00000549237 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
USP15-212ENST00000549237 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
USP15-212ENST00000549237 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms