RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 POTEFA5A3E0 1075 aa7.7□□□□□ -1.18
DEPDC4-206ENST00000549100 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
DEPDC4-206ENST00000549100 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
DEPDC4-206ENST00000549100 ZBTB22O15209 634 aa7.67□□□□□ -1.18
DEPDC4-206ENST00000549100 MS4A3Q96HJ5 214 aa7.66□□□□□ -1.18
DEPDC4-206ENST00000549100 ATXN8OSP0DMR3 200 aa7.64□□□□□ -1.19
DEPDC4-206ENST00000549100 ATN1P54259 1190 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-206ENST00000549100 ST18O60284 1047 aa7.61□□□□□ -1.19
DEPDC4-206ENST00000549100 SLC4A1APQ9BWU0 796 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-206ENST00000549100 PAK3O75914 559 aaPredicted RBP7.56□□□□□ -1.2
DEPDC4-206ENST00000549100 COLQQ9Y215 455 aaPredicted RBP7.53□□□□□ -1.2
DEPDC4-206ENST00000549100 TRPC6Q9Y210 931 aa7.51□□□□□ -1.21
DEPDC4-206ENST00000549100 MNX1P50219 401 aaPredicted RBP7.5□□□□□ -1.21
DEPDC4-206ENST00000549100 BMP2KQ9NSY1 1161 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-206ENST00000549100 SLAIN1Q8ND83 568 aa7.44□□□□□ -1.22
DEPDC4-206ENST00000549100 MARVELD3Q96A59 401 aa7.42□□□□□ -1.22
DEPDC4-206ENST00000549100 NPM1P06748 294 aaKnown RBP eCLIP7.39□□□□□ -1.23
DEPDC4-206ENST00000549100 SEC24BO95487 1268 aa7.38□□□□□ -1.23
DEPDC4-206ENST00000549100 KIF12Q96FN5 646 aa7.37□□□□□ -1.23
DEPDC4-206ENST00000549100 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
DEPDC4-206ENST00000549100 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
DEPDC4-206ENST00000549100 POTEB3A0JP26 581 aa7.36□□□□□ -1.23
DEPDC4-206ENST00000549100 POTEBQ6S5H4 581 aa7.36□□□□□ -1.23
DEPDC4-206ENST00000549100 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
DEPDC4-206ENST00000549100 CCDC61Q9Y6R9 512 aa7.36□□□□□ -1.23
DEPDC4-206ENST00000549100 STAG3Q9UJ98 1225 aa7.34□□□□□ -1.23
DEPDC4-206ENST00000549100 TMEM121BQ9BXQ6 578 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-206ENST00000549100 TTLL13PA6NNM8 815 aa7.32□□□□□ -1.24
DEPDC4-206ENST00000549100 TIE1P35590 1138 aa7.32□□□□□ -1.24
DEPDC4-206ENST00000549100 MAP3K13O43283 966 aa7.3□□□□□ -1.24
DEPDC4-206ENST00000549100 TRIM35Q9UPQ4 493 aa7.26□□□□□ -1.25
DEPDC4-206ENST00000549100 IER5LQ5T953 404 aa7.23□□□□□ -1.25
DEPDC4-206ENST00000549100 HS3ST6Q96QI5 342 aa7.23□□□□□ -1.25
DEPDC4-206ENST00000549100 EMP3P54852 163 aa7.21□□□□□ -1.26
DEPDC4-206ENST00000549100 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
DEPDC4-206ENST00000549100 SNPHO15079 494 aa7.18□□□□□ -1.26
DEPDC4-206ENST00000549100 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-206ENST00000549100 PLCG2P16885 1265 aa7.14□□□□□ -1.27
DEPDC4-206ENST00000549100 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-206ENST00000549100 RASEFQ8IZ41 740 aa7.11□□□□□ -1.27
DEPDC4-206ENST00000549100 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-206ENST00000549100 SPDYE4A6NLX3 237 aa7.08□□□□□ -1.28
DEPDC4-206ENST00000549100 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
DEPDC4-206ENST00000549100 PCDHB13Q9Y5F0 798 aa7.07□□□□□ -1.28
DEPDC4-206ENST00000549100 IFNL1Q8IU54 200 aa7.06□□□□□ -1.28
DEPDC4-206ENST00000549100 OCEL1Q9H607 264 aa7.04□□□□□ -1.28
DEPDC4-206ENST00000549100 MYT1LQ9UL68 1186 aa7.03□□□□□ -1.28
DEPDC4-206ENST00000549100 SGIP1Q9BQI5 828 aa7.02□□□□□ -1.29
DEPDC4-206ENST00000549100 HOXB3P14651 431 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-206ENST00000549100 PDCD7Q8N8D1 485 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-206ENST00000549100 C3orf67Q6ZVT6 689 aa6.91□□□□□ -1.3
DEPDC4-206ENST00000549100 ERBB3P21860 1342 aa6.91□□□□□ -1.3
DEPDC4-206ENST00000549100 HOXB1P14653 301 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-206ENST00000549100 VARS2Q5ST30 1063 aaKnown RBP6.87□□□□□ -1.31
DEPDC4-206ENST00000549100 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
DEPDC4-206ENST00000549100 NUBP1P53384 320 aa6.84□□□□□ -1.31
DEPDC4-206ENST00000549100 MIER1Q8N108 512 aa6.84□□□□□ -1.31
DEPDC4-206ENST00000549100 L3MBTL3Q96JM7 780 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-206ENST00000549100 ZNF687Q8N1G0 1237 aa6.81□□□□□ -1.32
DEPDC4-206ENST00000549100 PCDHB8Q9UN66 801 aa6.81□□□□□ -1.32
DEPDC4-206ENST00000549100 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
DEPDC4-206ENST00000549100 PROM2Q8N271 834 aa6.8□□□□□ -1.32
DEPDC4-206ENST00000549100 ANKRD13DQ6ZTN6 518 aa6.79□□□□□ -1.32
DEPDC4-206ENST00000549100 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
DEPDC4-206ENST00000549100 PTGER2P43116 358 aa6.76□□□□□ -1.33
DEPDC4-206ENST00000549100 PYGBP11216 843 aa6.74□□□□□ -1.33
DEPDC4-206ENST00000549100 PLEKHG5O94827 1062 aa6.73□□□□□ -1.33
DEPDC4-206ENST00000549100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.73□□□□□ -1.33
DEPDC4-206ENST00000549100 DOK7Q18PE1 504 aa6.71□□□□□ -1.34
DEPDC4-206ENST00000549100 ILDR1Q86SU0 546 aaPredicted RBP6.7□□□□□ -1.34
DEPDC4-206ENST00000549100 MKRN3Q13064 507 aaKnown RBP6.69□□□□□ -1.34
DEPDC4-206ENST00000549100 FAM212AQ96EL1 285 aa6.68□□□□□ -1.34
DEPDC4-206ENST00000549100 LSM11P83369 360 aaKnown RBP eCLIP6.67□□□□□ -1.34
DEPDC4-206ENST00000549100 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
DEPDC4-206ENST00000549100 HCSTQ9UBK5 93 aa6.66□□□□□ -1.34
DEPDC4-206ENST00000549100 POTEEQ6S8J3 1075 aa6.65□□□□□ -1.34
DEPDC4-206ENST00000549100 PLCD3Q8N3E9 789 aa6.65□□□□□ -1.34
DEPDC4-206ENST00000549100 EHMT2Q96KQ7 1210 aa6.65□□□□□ -1.34
DEPDC4-206ENST00000549100 IRX2Q9BZI1 471 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-206ENST00000549100 BOLA1Q9Y3E2 137 aa6.65□□□□□ -1.34
DEPDC4-206ENST00000549100 GOLGA2Q08379 1002 aa6.63□□□□□ -1.35
DEPDC4-206ENST00000549100 CSRNP3Q8WYN3 585 aa6.63□□□□□ -1.35
DEPDC4-206ENST00000549100 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
DEPDC4-206ENST00000549100 DCAF8Q5TAQ9 597 aa6.61□□□□□ -1.35
DEPDC4-206ENST00000549100 TMEM92Q6UXU6 159 aa6.61□□□□□ -1.35
DEPDC4-206ENST00000549100 KHSRPQ92945 711 aaKnown RBP eCLIP6.6□□□□□ -1.35
DEPDC4-206ENST00000549100 ARSIQ5FYB1 569 aa6.59□□□□□ -1.35
DEPDC4-206ENST00000549100 ZSWIM6Q9HCJ5 1215 aa6.58□□□□□ -1.36
DEPDC4-206ENST00000549100 AXIN2Q9Y2T1 843 aa6.58□□□□□ -1.36
DEPDC4-206ENST00000549100 ZNF316A6NFI3 1004 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-206ENST00000549100 G3V3G9 751 aa6.54□□□□□ -1.36
DEPDC4-206ENST00000549100 PSEN1P49768 467 aa6.54□□□□□ -1.36
DEPDC4-206ENST00000549100 ZBTB47Q9UFB7 747 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-206ENST00000549100 LCE2BO14633 110 aa6.51□□□□□ -1.37
DEPDC4-206ENST00000549100 RGS20O76081 388 aa6.51□□□□□ -1.37
DEPDC4-206ENST00000549100 ZNF467Q7Z7K2 595 aaPredicted RBP6.5□□□□□ -1.37
DEPDC4-206ENST00000549100 Q6ZNB5 142 aa6.49□□□□□ -1.37
DEPDC4-206ENST00000549100 CABP2Q9NPB3 220 aa6.49□□□□□ -1.37
DEPDC4-206ENST00000549100 ADGRD1Q6QNK2 874 aa6.47□□□□□ -1.37
DEPDC4-206ENST00000549100 PBX2P40425 430 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms