RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
TMCC3-202ENST00000548918 RNF39Q9H2S5 420 aa9.92□□□□□ -0.82
TMCC3-202ENST00000548918 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
TMCC3-202ENST00000548918 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
TMCC3-202ENST00000548918 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
TMCC3-202ENST00000548918 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
TMCC3-202ENST00000548918 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
TMCC3-202ENST00000548918 NUBP1P53384 320 aa9.84□□□□□ -0.83
TMCC3-202ENST00000548918 BRPF1P55201 1214 aaPredicted RBP9.82□□□□□ -0.84
TMCC3-202ENST00000548918 STK25O00506 426 aa9.81□□□□□ -0.84
TMCC3-202ENST00000548918 GSE1Q14687 1217 aa9.8□□□□□ -0.84
TMCC3-202ENST00000548918 LMOD2Q6P5Q4 547 aa9.8□□□□□ -0.84
TMCC3-202ENST00000548918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
TMCC3-202ENST00000548918 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
TMCC3-202ENST00000548918 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
TMCC3-202ENST00000548918 SUPT5HO00267 1087 aaKnown RBP9.76□□□□□ -0.85
TMCC3-202ENST00000548918 CADPS2Q86UW7 1296 aa9.75□□□□□ -0.85
TMCC3-202ENST00000548918 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
TMCC3-202ENST00000548918 DSG3P32926 999 aa9.74□□□□□ -0.85
TMCC3-202ENST00000548918 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
TMCC3-202ENST00000548918 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
TMCC3-202ENST00000548918 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
TMCC3-202ENST00000548918 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
TMCC3-202ENST00000548918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
TMCC3-202ENST00000548918 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
TMCC3-202ENST00000548918 STK24Q9Y6E0 443 aa9.71□□□□□ -0.86
TMCC3-202ENST00000548918 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
TMCC3-202ENST00000548918 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
TMCC3-202ENST00000548918 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
TMCC3-202ENST00000548918 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
TMCC3-202ENST00000548918 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
TMCC3-202ENST00000548918 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
TMCC3-202ENST00000548918 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
TMCC3-202ENST00000548918 RYDENQ9NUL5 291 aaKnown RBP9.61□□□□□ -0.87
TMCC3-202ENST00000548918 FAM212AQ96EL1 285 aa9.6□□□□□ -0.87
TMCC3-202ENST00000548918 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
TMCC3-202ENST00000548918 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
TMCC3-202ENST00000548918 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
TMCC3-202ENST00000548918 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
TMCC3-202ENST00000548918 PYGBP11216 843 aa9.55□□□□□ -0.88
TMCC3-202ENST00000548918 SEMA3EO15041 775 aa9.52□□□□□ -0.89
TMCC3-202ENST00000548918 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
TMCC3-202ENST00000548918 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
TMCC3-202ENST00000548918 ZMYND10O75800 440 aa9.47□□□□□ -0.89
TMCC3-202ENST00000548918 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
TMCC3-202ENST00000548918 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
TMCC3-202ENST00000548918 PPP1R37O75864 691 aa9.44□□□□□ -0.9
TMCC3-202ENST00000548918 E2F4Q16254 413 aa9.42□□□□□ -0.9
TMCC3-202ENST00000548918 HRCP23327 699 aa9.41□□□□□ -0.9
TMCC3-202ENST00000548918 GPBP1L1Q9HC44 474 aaPredicted RBP9.41□□□□□ -0.9
TMCC3-202ENST00000548918 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
TMCC3-202ENST00000548918 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
TMCC3-202ENST00000548918 ZMYND15Q9H091 742 aa9.39□□□□□ -0.91
TMCC3-202ENST00000548918 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
TMCC3-202ENST00000548918 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
TMCC3-202ENST00000548918 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
TMCC3-202ENST00000548918 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
TMCC3-202ENST00000548918 PCDHB13Q9Y5F0 798 aa9.35□□□□□ -0.91
TMCC3-202ENST00000548918 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
TMCC3-202ENST00000548918 PDAP1Q13442 181 aaKnown RBP9.34□□□□□ -0.91
TMCC3-202ENST00000548918 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
TMCC3-202ENST00000548918 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
TMCC3-202ENST00000548918 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
TMCC3-202ENST00000548918 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
TMCC3-202ENST00000548918 ZNF467Q7Z7K2 595 aaPredicted RBP9.32□□□□□ -0.92
TMCC3-202ENST00000548918 AK7Q96M32 723 aa9.3□□□□□ -0.92
TMCC3-202ENST00000548918 KDM4CQ9H3R0 1056 aa9.3□□□□□ -0.92
TMCC3-202ENST00000548918 PSEN1P49768 467 aa9.28□□□□□ -0.92
TMCC3-202ENST00000548918 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
TMCC3-202ENST00000548918 ARID3AQ99856 593 aa9.28□□□□□ -0.92
TMCC3-202ENST00000548918 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
TMCC3-202ENST00000548918 POTEDQ86YR6 584 aa9.26□□□□□ -0.93
TMCC3-202ENST00000548918 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
TMCC3-202ENST00000548918 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
TMCC3-202ENST00000548918 MFSD10Q14728 455 aa9.25□□□□□ -0.93
TMCC3-202ENST00000548918 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
TMCC3-202ENST00000548918 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
TMCC3-202ENST00000548918 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
TMCC3-202ENST00000548918 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
TMCC3-202ENST00000548918 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
TMCC3-202ENST00000548918 AKT1S1Q96B36 256 aa9.24□□□□□ -0.93
TMCC3-202ENST00000548918 TRIM66O15016 1216 aa9.23□□□□□ -0.93
TMCC3-202ENST00000548918 PDE4DQ08499 809 aa9.22□□□□□ -0.93
TMCC3-202ENST00000548918 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
TMCC3-202ENST00000548918 REM2Q8IYK8 340 aaPredicted RBP9.22□□□□□ -0.93
TMCC3-202ENST00000548918 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
TMCC3-202ENST00000548918 ARID3CA6NKF2 412 aa9.21□□□□□ -0.94
TMCC3-202ENST00000548918 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
TMCC3-202ENST00000548918 NLRP6P59044 892 aa9.2□□□□□ -0.94
TMCC3-202ENST00000548918 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
TMCC3-202ENST00000548918 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
TMCC3-202ENST00000548918 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
TMCC3-202ENST00000548918 MS4A4AQ96JQ5 239 aa9.18□□□□□ -0.94
TMCC3-202ENST00000548918 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
TMCC3-202ENST00000548918 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
TMCC3-202ENST00000548918 CABP2Q9NPB3 220 aa9.17□□□□□ -0.94
TMCC3-202ENST00000548918 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
TMCC3-202ENST00000548918 SOX12O15370 315 aa9.16□□□□□ -0.94
TMCC3-202ENST00000548918 GPR37O15354 613 aa9.15□□□□□ -0.94
TMCC3-202ENST00000548918 PDE4AP27815 886 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms