RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
NCKAP1L-205ENST00000548916 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
NCKAP1L-205ENST00000548916 FAM163AQ96GL9 167 aaPredicted RBP15.27■□□□□ 0.04
NCKAP1L-205ENST00000548916 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
NCKAP1L-205ENST00000548916 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
NCKAP1L-205ENST00000548916 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
NCKAP1L-205ENST00000548916 LCE2DQ5TA82 110 aaPredicted RBP15.21■□□□□ 0.03
NCKAP1L-205ENST00000548916 MS4A3Q96HJ5 214 aa15.2■□□□□ 0.02
NCKAP1L-205ENST00000548916 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
NCKAP1L-205ENST00000548916 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
NCKAP1L-205ENST00000548916 CDAN1Q8IWY9 1227 aa15.01□□□□□ -0.01
NCKAP1L-205ENST00000548916 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
NCKAP1L-205ENST00000548916 TSPYL2Q9H2G4 693 aaPredicted RBP14.94□□□□□ -0.02
NCKAP1L-205ENST00000548916 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
NCKAP1L-205ENST00000548916 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
NCKAP1L-205ENST00000548916 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
NCKAP1L-205ENST00000548916 SEC24BO95487 1268 aa14.86□□□□□ -0.03
NCKAP1L-205ENST00000548916 KIF12Q96FN5 646 aa14.84□□□□□ -0.03
NCKAP1L-205ENST00000548916 TIE1P35590 1138 aa14.83□□□□□ -0.04
NCKAP1L-205ENST00000548916 TRPC6Q9Y210 931 aa14.75□□□□□ -0.05
NCKAP1L-205ENST00000548916 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
NCKAP1L-205ENST00000548916 MAP3K13O43283 966 aa14.71□□□□□ -0.05
NCKAP1L-205ENST00000548916 ST18O60284 1047 aa14.71□□□□□ -0.05
NCKAP1L-205ENST00000548916 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
NCKAP1L-205ENST00000548916 SLAIN1Q8ND83 568 aa14.7□□□□□ -0.06
NCKAP1L-205ENST00000548916 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
NCKAP1L-205ENST00000548916 IER5LQ5T953 404 aa14.69□□□□□ -0.06
NCKAP1L-205ENST00000548916 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
NCKAP1L-205ENST00000548916 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
NCKAP1L-205ENST00000548916 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
NCKAP1L-205ENST00000548916 TMEM121BQ9BXQ6 578 aaPredicted RBP14.58□□□□□ -0.08
NCKAP1L-205ENST00000548916 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
NCKAP1L-205ENST00000548916 PLCG2P16885 1265 aa14.51□□□□□ -0.09
NCKAP1L-205ENST00000548916 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
NCKAP1L-205ENST00000548916 SNPHO15079 494 aa14.49□□□□□ -0.09
NCKAP1L-205ENST00000548916 PCDHB13Q9Y5F0 798 aa14.49□□□□□ -0.09
NCKAP1L-205ENST00000548916 MIER1Q8N108 512 aa14.42□□□□□ -0.1
NCKAP1L-205ENST00000548916 PROM2Q8N271 834 aa14.4□□□□□ -0.1
NCKAP1L-205ENST00000548916 MARVELD3Q96A59 401 aa14.39□□□□□ -0.11
NCKAP1L-205ENST00000548916 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
NCKAP1L-205ENST00000548916 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
NCKAP1L-205ENST00000548916 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
NCKAP1L-205ENST00000548916 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
NCKAP1L-205ENST00000548916 OCEL1Q9H607 264 aa14.29□□□□□ -0.12
NCKAP1L-205ENST00000548916 EMP3P54852 163 aa14.27□□□□□ -0.13
NCKAP1L-205ENST00000548916 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
NCKAP1L-205ENST00000548916 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
NCKAP1L-205ENST00000548916 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
NCKAP1L-205ENST00000548916 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
NCKAP1L-205ENST00000548916 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
NCKAP1L-205ENST00000548916 HS3ST6Q96QI5 342 aa14.16□□□□□ -0.14
NCKAP1L-205ENST00000548916 NUBP1P53384 320 aa14.15□□□□□ -0.14
NCKAP1L-205ENST00000548916 C3orf67Q6ZVT6 689 aa14.15□□□□□ -0.14
NCKAP1L-205ENST00000548916 FKBP8Q14318 412 aa14.14□□□□□ -0.15
NCKAP1L-205ENST00000548916 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
NCKAP1L-205ENST00000548916 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
NCKAP1L-205ENST00000548916 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
NCKAP1L-205ENST00000548916 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
NCKAP1L-205ENST00000548916 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
NCKAP1L-205ENST00000548916 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
NCKAP1L-205ENST00000548916 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
NCKAP1L-205ENST00000548916 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
NCKAP1L-205ENST00000548916 PYGBP11216 843 aa13.94□□□□□ -0.18
NCKAP1L-205ENST00000548916 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
NCKAP1L-205ENST00000548916 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
NCKAP1L-205ENST00000548916 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
NCKAP1L-205ENST00000548916 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
NCKAP1L-205ENST00000548916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.19
NCKAP1L-205ENST00000548916 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
NCKAP1L-205ENST00000548916 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
NCKAP1L-205ENST00000548916 ERBB3P21860 1342 aa13.82□□□□□ -0.2
NCKAP1L-205ENST00000548916 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
NCKAP1L-205ENST00000548916 G3V3G9 751 aa13.79□□□□□ -0.2
NCKAP1L-205ENST00000548916 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
NCKAP1L-205ENST00000548916 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
NCKAP1L-205ENST00000548916 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
NCKAP1L-205ENST00000548916 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
NCKAP1L-205ENST00000548916 PTGER2P43116 358 aa13.68□□□□□ -0.22
NCKAP1L-205ENST00000548916 VARS2Q5ST30 1063 aaKnown RBP13.67□□□□□ -0.22
NCKAP1L-205ENST00000548916 PSEN1P49768 467 aa13.66□□□□□ -0.22
NCKAP1L-205ENST00000548916 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
NCKAP1L-205ENST00000548916 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
NCKAP1L-205ENST00000548916 GSE1Q14687 1217 aa13.63□□□□□ -0.23
NCKAP1L-205ENST00000548916 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
NCKAP1L-205ENST00000548916 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
NCKAP1L-205ENST00000548916 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
NCKAP1L-205ENST00000548916 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
NCKAP1L-205ENST00000548916 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
NCKAP1L-205ENST00000548916 ZSWIM6Q9HCJ5 1215 aa13.52□□□□□ -0.25
NCKAP1L-205ENST00000548916 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
NCKAP1L-205ENST00000548916 CABP2Q9NPB3 220 aa13.51□□□□□ -0.25
NCKAP1L-205ENST00000548916 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
NCKAP1L-205ENST00000548916 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
NCKAP1L-205ENST00000548916 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
NCKAP1L-205ENST00000548916 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
NCKAP1L-205ENST00000548916 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
NCKAP1L-205ENST00000548916 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
NCKAP1L-205ENST00000548916 HCSTQ9UBK5 93 aa13.29□□□□□ -0.28
NCKAP1L-205ENST00000548916 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
NCKAP1L-205ENST00000548916 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms