RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
USP15-209ENST00000548620 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
USP15-209ENST00000548620 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
USP15-209ENST00000548620 PKD2Q13563 968 aa15.14■□□□□ 0.01
USP15-209ENST00000548620 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
USP15-209ENST00000548620 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
USP15-209ENST00000548620 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
USP15-209ENST00000548620 PYGBP11216 843 aa15.07■□□□□ 0
USP15-209ENST00000548620 TRIM41Q8WV44 630 aa15.06■□□□□ 0
USP15-209ENST00000548620 CHRM1P11229 460 aaPredicted RBP15.04■□□□□ -0
USP15-209ENST00000548620 KIF12Q96FN5 646 aa15.04■□□□□ -0
USP15-209ENST00000548620 ECM2O94769 699 aaPredicted RBP15.01□□□□□ -0.01
USP15-209ENST00000548620 MAP3K13O43283 966 aa15□□□□□ -0.01
USP15-209ENST00000548620 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
USP15-209ENST00000548620 CLCN6P51797 869 aa14.95□□□□□ -0.02
USP15-209ENST00000548620 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
USP15-209ENST00000548620 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
USP15-209ENST00000548620 GABBR2O75899 941 aa14.93□□□□□ -0.02
USP15-209ENST00000548620 MS4A3Q96HJ5 214 aa14.93□□□□□ -0.02
USP15-209ENST00000548620 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
USP15-209ENST00000548620 GALR2O43603 387 aaPredicted RBP14.91□□□□□ -0.02
USP15-209ENST00000548620 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
USP15-209ENST00000548620 RGL2O15211 777 aa14.89□□□□□ -0.03
USP15-209ENST00000548620 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
USP15-209ENST00000548620 PCDHB8Q9UN66 801 aa14.87□□□□□ -0.03
USP15-209ENST00000548620 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
USP15-209ENST00000548620 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
USP15-209ENST00000548620 VGFO15240 615 aaPredicted RBP14.74□□□□□ -0.05
USP15-209ENST00000548620 PDAP1Q13442 181 aaKnown RBP14.74□□□□□ -0.05
USP15-209ENST00000548620 TIE1P35590 1138 aa14.72□□□□□ -0.05
USP15-209ENST00000548620 PSEN1P49768 467 aa14.72□□□□□ -0.05
USP15-209ENST00000548620 BMP2KQ9NSY1 1161 aaPredicted RBP14.7□□□□□ -0.06
USP15-209ENST00000548620 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
USP15-209ENST00000548620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.68□□□□□ -0.06
USP15-209ENST00000548620 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
USP15-209ENST00000548620 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
USP15-209ENST00000548620 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
USP15-209ENST00000548620 TMEM106CQ9BVX2 250 aa14.67□□□□□ -0.06
USP15-209ENST00000548620 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
USP15-209ENST00000548620 POTEIP0CG38 1075 aa14.65□□□□□ -0.06
USP15-209ENST00000548620 ASTLQ6HA08 431 aaPredicted RBP14.65□□□□□ -0.06
USP15-209ENST00000548620 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
USP15-209ENST00000548620 ATN1P54259 1190 aaPredicted RBP14.61□□□□□ -0.07
USP15-209ENST00000548620 STK25O00506 426 aa14.59□□□□□ -0.07
USP15-209ENST00000548620 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
USP15-209ENST00000548620 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
USP15-209ENST00000548620 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
USP15-209ENST00000548620 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
USP15-209ENST00000548620 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
USP15-209ENST00000548620 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
USP15-209ENST00000548620 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
USP15-209ENST00000548620 GOLGA2Q08379 1002 aa14.47□□□□□ -0.09
USP15-209ENST00000548620 EFCAB3Q8N7B9 438 aa14.46□□□□□ -0.09
USP15-209ENST00000548620 DNAJC5Q9H3Z4 198 aa14.46□□□□□ -0.09
USP15-209ENST00000548620 IER5LQ5T953 404 aa14.44□□□□□ -0.1
USP15-209ENST00000548620 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
USP15-209ENST00000548620 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
USP15-209ENST00000548620 C7P10643 843 aa14.4□□□□□ -0.1
USP15-209ENST00000548620 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
USP15-209ENST00000548620 METRNQ9UJH8 293 aa14.39□□□□□ -0.11
USP15-209ENST00000548620 SOX12O15370 315 aa14.37□□□□□ -0.11
USP15-209ENST00000548620 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
USP15-209ENST00000548620 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
USP15-209ENST00000548620 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
USP15-209ENST00000548620 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
USP15-209ENST00000548620 MFRPQ9BY79 579 aa14.35□□□□□ -0.11
USP15-209ENST00000548620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.114e-8■■■□□ 18.1
USP15-209ENST00000548620 PHF8Q9UPP1 1060 aa14.34□□□□□ -0.11
USP15-209ENST00000548620 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
USP15-209ENST00000548620 FBXO22Q8NEZ5 403 aa14.31□□□□□ -0.12
USP15-209ENST00000548620 SEC24BO95487 1268 aa14.3□□□□□ -0.12
USP15-209ENST00000548620 PDCD7Q8N8D1 485 aaKnown RBP14.3□□□□□ -0.12
USP15-209ENST00000548620 OCEL1Q9H607 264 aa14.3□□□□□ -0.12
USP15-209ENST00000548620 PLCG2P16885 1265 aa14.29□□□□□ -0.12
USP15-209ENST00000548620 NLRP6P59044 892 aa14.29□□□□□ -0.12
USP15-209ENST00000548620 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
USP15-209ENST00000548620 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
USP15-209ENST00000548620 GTPBP6O43824 516 aaPredicted RBP14.23□□□□□ -0.13
USP15-209ENST00000548620 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
USP15-209ENST00000548620 RYDENQ9NUL5 291 aaKnown RBP14.2□□□□□ -0.14
USP15-209ENST00000548620 POTEB2H3BUK9 544 aa14.19□□□□□ -0.14
USP15-209ENST00000548620 PPP1R37O75864 691 aa14.15□□□□□ -0.14
USP15-209ENST00000548620 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
USP15-209ENST00000548620 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
USP15-209ENST00000548620 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
USP15-209ENST00000548620 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
USP15-209ENST00000548620 L3MBTL3Q96JM7 780 aaPredicted RBP14.11□□□□□ -0.15
USP15-209ENST00000548620 BOLA1Q9Y3E2 137 aa14.1□□□□□ -0.15
USP15-209ENST00000548620 LHX8Q68G74 356 aa14.07□□□□□ -0.16
USP15-209ENST00000548620 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
USP15-209ENST00000548620 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
USP15-209ENST00000548620 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
USP15-209ENST00000548620 G3V3G9 751 aa14.03□□□□□ -0.16
USP15-209ENST00000548620 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
USP15-209ENST00000548620 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
USP15-209ENST00000548620 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
USP15-209ENST00000548620 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
USP15-209ENST00000548620 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
USP15-209ENST00000548620 TMEM92Q6UXU6 159 aa13.9□□□□□ -0.18
USP15-209ENST00000548620 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms