RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
USP25-209ENST00000547201 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
USP25-209ENST00000547201 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
USP25-209ENST00000547201 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
USP25-209ENST00000547201 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
USP25-209ENST00000547201 FBXO3Q9UK99 471 aa11.8□□□□□ -0.52
USP25-209ENST00000547201 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
USP25-209ENST00000547201 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
USP25-209ENST00000547201 NUBP1P53384 320 aa11.76□□□□□ -0.53
USP25-209ENST00000547201 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
USP25-209ENST00000547201 MAP3K13O43283 966 aa11.74□□□□□ -0.53
USP25-209ENST00000547201 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
USP25-209ENST00000547201 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
USP25-209ENST00000547201 ABCC9O60706 1549 aa11.7□□□□□ -0.54
USP25-209ENST00000547201 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
USP25-209ENST00000547201 C7P10643 843 aa11.68□□□□□ -0.54
USP25-209ENST00000547201 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
USP25-209ENST00000547201 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
USP25-209ENST00000547201 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
USP25-209ENST00000547201 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
USP25-209ENST00000547201 TIE1P35590 1138 aa11.66□□□□□ -0.54
USP25-209ENST00000547201 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
USP25-209ENST00000547201 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
USP25-209ENST00000547201 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
USP25-209ENST00000547201 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
USP25-209ENST00000547201 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
USP25-209ENST00000547201 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
USP25-209ENST00000547201 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
USP25-209ENST00000547201 IFNL1Q8IU54 200 aa11.57□□□□□ -0.56
USP25-209ENST00000547201 PYGBP11216 843 aa11.53□□□□□ -0.56
USP25-209ENST00000547201 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
USP25-209ENST00000547201 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
USP25-209ENST00000547201 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
USP25-209ENST00000547201 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
USP25-209ENST00000547201 GSE1Q14687 1217 aa11.49□□□□□ -0.57
USP25-209ENST00000547201 IER5LQ5T953 404 aa11.49□□□□□ -0.57
USP25-209ENST00000547201 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
USP25-209ENST00000547201 SEC24BO95487 1268 aa11.48□□□□□ -0.57
USP25-209ENST00000547201 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
USP25-209ENST00000547201 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
USP25-209ENST00000547201 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
USP25-209ENST00000547201 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
USP25-209ENST00000547201 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
USP25-209ENST00000547201 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
USP25-209ENST00000547201 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
USP25-209ENST00000547201 PLCG2P16885 1265 aa11.36□□□□□ -0.59
USP25-209ENST00000547201 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
USP25-209ENST00000547201 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
USP25-209ENST00000547201 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
USP25-209ENST00000547201 POTEMA6NI47 508 aa11.29□□□□□ -0.6
USP25-209ENST00000547201 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
USP25-209ENST00000547201 PSEN1P49768 467 aa11.27□□□□□ -0.61
USP25-209ENST00000547201 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
USP25-209ENST00000547201 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
USP25-209ENST00000547201 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
USP25-209ENST00000547201 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
USP25-209ENST00000547201 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
USP25-209ENST00000547201 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
USP25-209ENST00000547201 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
USP25-209ENST00000547201 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
USP25-209ENST00000547201 NACADO15069 1562 aa11.17□□□□□ -0.62
USP25-209ENST00000547201 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
USP25-209ENST00000547201 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
USP25-209ENST00000547201 UNC13AQ9UPW8 1703 aa11.16□□□□□ -0.62
USP25-209ENST00000547201 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
USP25-209ENST00000547201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.624e-7■■■□□ 15.9
USP25-209ENST00000547201 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
USP25-209ENST00000547201 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.15□□□□□ -0.62
USP25-209ENST00000547201 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
USP25-209ENST00000547201 DCAF1Q9Y4B6 1507 aa11.13□□□□□ -0.63
USP25-209ENST00000547201 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
USP25-209ENST00000547201 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
USP25-209ENST00000547201 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
USP25-209ENST00000547201 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
USP25-209ENST00000547201 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
USP25-209ENST00000547201 SCRIBQ14160 1630 aa11.08□□□□□ -0.64
USP25-209ENST00000547201 ST18O60284 1047 aa11.05□□□□□ -0.64
USP25-209ENST00000547201 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
USP25-209ENST00000547201 SNPHO15079 494 aa11.04□□□□□ -0.64
USP25-209ENST00000547201 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
USP25-209ENST00000547201 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
USP25-209ENST00000547201 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
USP25-209ENST00000547201 G3V3G9 751 aa11.01□□□□□ -0.65
USP25-209ENST00000547201 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
USP25-209ENST00000547201 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
USP25-209ENST00000547201 VGFO15240 615 aaPredicted RBP10.98□□□□□ -0.65
USP25-209ENST00000547201 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
USP25-209ENST00000547201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
USP25-209ENST00000547201 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
USP25-209ENST00000547201 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
USP25-209ENST00000547201 SOX12O15370 315 aa10.91□□□□□ -0.66
USP25-209ENST00000547201 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
USP25-209ENST00000547201 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
USP25-209ENST00000547201 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
USP25-209ENST00000547201 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
USP25-209ENST00000547201 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
USP25-209ENST00000547201 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
USP25-209ENST00000547201 PHF8Q9UPP1 1060 aa10.85□□□□□ -0.67
USP25-209ENST00000547201 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
USP25-209ENST00000547201 EMP3P54852 163 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms