RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
HCFC2-203ENST00000547194 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
HCFC2-203ENST00000547194 SLC39A7Q92504 469 aa11.15□□□□□ -0.62
HCFC2-203ENST00000547194 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
HCFC2-203ENST00000547194 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
HCFC2-203ENST00000547194 C7P10643 843 aa11.12□□□□□ -0.63
HCFC2-203ENST00000547194 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-203ENST00000547194 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
HCFC2-203ENST00000547194 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
HCFC2-203ENST00000547194 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
HCFC2-203ENST00000547194 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
HCFC2-203ENST00000547194 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
HCFC2-203ENST00000547194 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
HCFC2-203ENST00000547194 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
HCFC2-203ENST00000547194 BMP2KQ9NSY1 1161 aaPredicted RBP10.97□□□□□ -0.65
HCFC2-203ENST00000547194 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
HCFC2-203ENST00000547194 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
HCFC2-203ENST00000547194 MAP3K13O43283 966 aa10.93□□□□□ -0.66
HCFC2-203ENST00000547194 SEC24BO95487 1268 aa10.92□□□□□ -0.66
HCFC2-203ENST00000547194 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
HCFC2-203ENST00000547194 MIER1Q8N108 512 aa10.87□□□□□ -0.67
HCFC2-203ENST00000547194 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
HCFC2-203ENST00000547194 TIE1P35590 1138 aa10.86□□□□□ -0.67
HCFC2-203ENST00000547194 RASEFQ8IZ41 740 aa10.86□□□□□ -0.67
HCFC2-203ENST00000547194 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
HCFC2-203ENST00000547194 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
HCFC2-203ENST00000547194 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
HCFC2-203ENST00000547194 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
HCFC2-203ENST00000547194 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
HCFC2-203ENST00000547194 PROM2Q8N271 834 aa10.77□□□□□ -0.69
HCFC2-203ENST00000547194 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
HCFC2-203ENST00000547194 ST18O60284 1047 aa10.73□□□□□ -0.69
HCFC2-203ENST00000547194 PLCG2P16885 1265 aa10.69□□□□□ -0.7
HCFC2-203ENST00000547194 IER5LQ5T953 404 aa10.69□□□□□ -0.7
HCFC2-203ENST00000547194 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
HCFC2-203ENST00000547194 IFNL1Q8IU54 200 aa10.68□□□□□ -0.7
HCFC2-203ENST00000547194 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
HCFC2-203ENST00000547194 NUBP1P53384 320 aa10.6□□□□□ -0.71
HCFC2-203ENST00000547194 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
HCFC2-203ENST00000547194 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
HCFC2-203ENST00000547194 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
HCFC2-203ENST00000547194 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
HCFC2-203ENST00000547194 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
HCFC2-203ENST00000547194 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
HCFC2-203ENST00000547194 PYGBP11216 843 aa10.53□□□□□ -0.72
HCFC2-203ENST00000547194 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
HCFC2-203ENST00000547194 DCAF8Q5TAQ9 597 aa10.51□□□□□ -0.73
HCFC2-203ENST00000547194 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
HCFC2-203ENST00000547194 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
HCFC2-203ENST00000547194 SNPHO15079 494 aa10.48□□□□□ -0.73
HCFC2-203ENST00000547194 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
HCFC2-203ENST00000547194 EMP3P54852 163 aa10.45□□□□□ -0.74
HCFC2-203ENST00000547194 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
HCFC2-203ENST00000547194 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
HCFC2-203ENST00000547194 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
HCFC2-203ENST00000547194 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
HCFC2-203ENST00000547194 FKBP8Q14318 412 aa10.36□□□□□ -0.75
HCFC2-203ENST00000547194 HS3ST6Q96QI5 342 aa10.36□□□□□ -0.75
HCFC2-203ENST00000547194 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
HCFC2-203ENST00000547194 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
HCFC2-203ENST00000547194 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
HCFC2-203ENST00000547194 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
HCFC2-203ENST00000547194 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
HCFC2-203ENST00000547194 L3MBTL3Q96JM7 780 aaPredicted RBP10.31□□□□□ -0.76
HCFC2-203ENST00000547194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
HCFC2-203ENST00000547194 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
HCFC2-203ENST00000547194 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
HCFC2-203ENST00000547194 PSEN1P49768 467 aa10.24□□□□□ -0.77
HCFC2-203ENST00000547194 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
HCFC2-203ENST00000547194 G3V3G9 751 aa10.22□□□□□ -0.77
HCFC2-203ENST00000547194 GSE1Q14687 1217 aa10.2□□□□□ -0.78
HCFC2-203ENST00000547194 ZNF710Q8N1W2 664 aa10.18□□□□□ -0.78
HCFC2-203ENST00000547194 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
HCFC2-203ENST00000547194 ERBB3P21860 1342 aa10.15□□□□□ -0.78
HCFC2-203ENST00000547194 FBXO3Q9UK99 471 aa10.15□□□□□ -0.78
HCFC2-203ENST00000547194 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
HCFC2-203ENST00000547194 HOXB3P14651 431 aaPredicted RBP10.13□□□□□ -0.79
HCFC2-203ENST00000547194 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
HCFC2-203ENST00000547194 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
HCFC2-203ENST00000547194 VASPP50552 380 aaPredicted RBP10.09□□□□□ -0.79
HCFC2-203ENST00000547194 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
HCFC2-203ENST00000547194 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
HCFC2-203ENST00000547194 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
HCFC2-203ENST00000547194 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
HCFC2-203ENST00000547194 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
HCFC2-203ENST00000547194 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
HCFC2-203ENST00000547194 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
HCFC2-203ENST00000547194 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
HCFC2-203ENST00000547194 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
HCFC2-203ENST00000547194 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
HCFC2-203ENST00000547194 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
HCFC2-203ENST00000547194 TMEM92Q6UXU6 159 aa9.92□□□□□ -0.82
HCFC2-203ENST00000547194 ZNF687Q8N1G0 1237 aa9.91□□□□□ -0.82
HCFC2-203ENST00000547194 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
HCFC2-203ENST00000547194 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
HCFC2-203ENST00000547194 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
HCFC2-203ENST00000547194 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
HCFC2-203ENST00000547194 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
HCFC2-203ENST00000547194 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
HCFC2-203ENST00000547194 PTGER2P43116 358 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms