RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
RAB3IP-209ENST00000547055 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
RAB3IP-209ENST00000547055 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
RAB3IP-209ENST00000547055 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
RAB3IP-209ENST00000547055 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
RAB3IP-209ENST00000547055 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
RAB3IP-209ENST00000547055 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-209ENST00000547055 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
RAB3IP-209ENST00000547055 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
RAB3IP-209ENST00000547055 MAMSTRQ6ZN01 415 aa11.12□□□□□ -0.63
RAB3IP-209ENST00000547055 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
RAB3IP-209ENST00000547055 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-209ENST00000547055 C7P10643 843 aa11.07□□□□□ -0.64
RAB3IP-209ENST00000547055 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
RAB3IP-209ENST00000547055 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
RAB3IP-209ENST00000547055 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-209ENST00000547055 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-209ENST00000547055 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.65
RAB3IP-209ENST00000547055 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
RAB3IP-209ENST00000547055 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
RAB3IP-209ENST00000547055 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
RAB3IP-209ENST00000547055 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
RAB3IP-209ENST00000547055 NUBP1P53384 320 aa10.97□□□□□ -0.65
RAB3IP-209ENST00000547055 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
RAB3IP-209ENST00000547055 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
RAB3IP-209ENST00000547055 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
RAB3IP-209ENST00000547055 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
RAB3IP-209ENST00000547055 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
RAB3IP-209ENST00000547055 MAP3K13O43283 966 aa10.86□□□□□ -0.67
RAB3IP-209ENST00000547055 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
RAB3IP-209ENST00000547055 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
RAB3IP-209ENST00000547055 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-209ENST00000547055 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
RAB3IP-209ENST00000547055 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
RAB3IP-209ENST00000547055 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
RAB3IP-209ENST00000547055 GSE1Q14687 1217 aa10.78□□□□□ -0.68
RAB3IP-209ENST00000547055 SGIP1Q9BQI5 828 aa10.78□□□□□ -0.68
RAB3IP-209ENST00000547055 PYGBP11216 843 aa10.76□□□□□ -0.69
RAB3IP-209ENST00000547055 ST18O60284 1047 aa10.75□□□□□ -0.69
RAB3IP-209ENST00000547055 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
RAB3IP-209ENST00000547055 BMP2KQ9NSY1 1161 aaPredicted RBP10.74□□□□□ -0.69
RAB3IP-209ENST00000547055 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
RAB3IP-209ENST00000547055 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
RAB3IP-209ENST00000547055 TIE1P35590 1138 aa10.71□□□□□ -0.69
RAB3IP-209ENST00000547055 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-209ENST00000547055 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
RAB3IP-209ENST00000547055 CHRM1P11229 460 aaPredicted RBP10.64□□□□□ -0.71
RAB3IP-209ENST00000547055 PCDHB8Q9UN66 801 aa10.64□□□□□ -0.71
RAB3IP-209ENST00000547055 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
RAB3IP-209ENST00000547055 SEC24BO95487 1268 aa10.62□□□□□ -0.71
RAB3IP-209ENST00000547055 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
RAB3IP-209ENST00000547055 ZNF467Q7Z7K2 595 aaPredicted RBP10.61□□□□□ -0.71
RAB3IP-209ENST00000547055 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
RAB3IP-209ENST00000547055 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
RAB3IP-209ENST00000547055 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
RAB3IP-209ENST00000547055 IER5LQ5T953 404 aa10.53□□□□□ -0.72
RAB3IP-209ENST00000547055 PSEN1P49768 467 aa10.51□□□□□ -0.73
RAB3IP-209ENST00000547055 PDAP1Q13442 181 aaKnown RBP10.49□□□□□ -0.73
RAB3IP-209ENST00000547055 MARVELD3Q96A59 401 aa10.48□□□□□ -0.73
RAB3IP-209ENST00000547055 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
RAB3IP-209ENST00000547055 PLCG2P16885 1265 aa10.45□□□□□ -0.74
RAB3IP-209ENST00000547055 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-209ENST00000547055 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
RAB3IP-209ENST00000547055 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
RAB3IP-209ENST00000547055 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
RAB3IP-209ENST00000547055 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
RAB3IP-209ENST00000547055 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
RAB3IP-209ENST00000547055 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
RAB3IP-209ENST00000547055 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
RAB3IP-209ENST00000547055 SNPHO15079 494 aa10.37□□□□□ -0.75
RAB3IP-209ENST00000547055 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
RAB3IP-209ENST00000547055 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-209ENST00000547055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.751e-6■■■□□ 15.5
RAB3IP-209ENST00000547055 PKD2Q13563 968 aa10.34□□□□□ -0.75
RAB3IP-209ENST00000547055 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
RAB3IP-209ENST00000547055 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
RAB3IP-209ENST00000547055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-209ENST00000547055 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-209ENST00000547055 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-209ENST00000547055 EMP3P54852 163 aa10.31□□□□□ -0.76
RAB3IP-209ENST00000547055 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
RAB3IP-209ENST00000547055 EFCAB3Q8N7B9 438 aa10.29□□□□□ -0.76
RAB3IP-209ENST00000547055 HS3ST6Q96QI5 342 aa10.29□□□□□ -0.76
RAB3IP-209ENST00000547055 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
RAB3IP-209ENST00000547055 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-209ENST00000547055 RGL2O15211 777 aa10.26□□□□□ -0.77
RAB3IP-209ENST00000547055 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-209ENST00000547055 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
RAB3IP-209ENST00000547055 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
RAB3IP-209ENST00000547055 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
RAB3IP-209ENST00000547055 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
RAB3IP-209ENST00000547055 STK25O00506 426 aa10.21□□□□□ -0.77
RAB3IP-209ENST00000547055 SOX12O15370 315 aa10.21□□□□□ -0.77
RAB3IP-209ENST00000547055 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
RAB3IP-209ENST00000547055 G3V3G9 751 aa10.2□□□□□ -0.78
RAB3IP-209ENST00000547055 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
RAB3IP-209ENST00000547055 PHF8Q9UPP1 1060 aa10.17□□□□□ -0.78
RAB3IP-209ENST00000547055 RNF166Q96A37 237 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-209ENST00000547055 NLRP6P59044 892 aa10.12□□□□□ -0.79
RAB3IP-209ENST00000547055 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms