RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ZNF579Q8NAF0 562 aaKnown RBP17.02■□□□□ 0.32
CPNE8-204ENST00000546603 GSE1Q14687 1217 aa17■□□□□ 0.31
CPNE8-204ENST00000546603 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
CPNE8-204ENST00000546603 CLCN6P51797 869 aa16.96■□□□□ 0.31
CPNE8-204ENST00000546603 PHF12Q96QT6 1004 aa16.92■□□□□ 0.3
CPNE8-204ENST00000546603 CIZ1Q9ULV3 898 aaPredicted RBP16.92■□□□□ 0.3
CPNE8-204ENST00000546603 GABBR2O75899 941 aa16.86■□□□□ 0.29
CPNE8-204ENST00000546603 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
CPNE8-204ENST00000546603 PYGBP11216 843 aa16.8■□□□□ 0.28
CPNE8-204ENST00000546603 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CPNE8-204ENST00000546603 CHRM1P11229 460 aaPredicted RBP16.78■□□□□ 0.28
CPNE8-204ENST00000546603 MAP3K13O43283 966 aa16.77■□□□□ 0.28
CPNE8-204ENST00000546603 SGIP1Q9BQI5 828 aa16.77■□□□□ 0.28
CPNE8-204ENST00000546603 PCDHB13Q9Y5F0 798 aa16.73■□□□□ 0.27
CPNE8-204ENST00000546603 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
CPNE8-204ENST00000546603 MS4A3Q96HJ5 214 aa16.72■□□□□ 0.27
CPNE8-204ENST00000546603 PKD2Q13563 968 aa16.65■□□□□ 0.26
CPNE8-204ENST00000546603 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
CPNE8-204ENST00000546603 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
CPNE8-204ENST00000546603 ECM2O94769 699 aaPredicted RBP16.61■□□□□ 0.25
CPNE8-204ENST00000546603 DCBLD2Q96PD2 775 aa16.61■□□□□ 0.25
CPNE8-204ENST00000546603 PCDHB8Q9UN66 801 aa16.58■□□□□ 0.24
CPNE8-204ENST00000546603 TIE1P35590 1138 aa16.53■□□□□ 0.24
CPNE8-204ENST00000546603 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
CPNE8-204ENST00000546603 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
CPNE8-204ENST00000546603 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
CPNE8-204ENST00000546603 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
CPNE8-204ENST00000546603 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
CPNE8-204ENST00000546603 RNF25Q96BH1 459 aaPredicted RBP16.46■□□□□ 0.23
CPNE8-204ENST00000546603 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
CPNE8-204ENST00000546603 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
CPNE8-204ENST00000546603 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
CPNE8-204ENST00000546603 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
CPNE8-204ENST00000546603 PSEN1P49768 467 aa16.43■□□□□ 0.22
CPNE8-204ENST00000546603 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
CPNE8-204ENST00000546603 TTLL13PA6NNM8 815 aa16.42■□□□□ 0.22
CPNE8-204ENST00000546603 RGL2O15211 777 aa16.42■□□□□ 0.22
CPNE8-204ENST00000546603 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
CPNE8-204ENST00000546603 ATN1P54259 1190 aaPredicted RBP16.38■□□□□ 0.21
CPNE8-204ENST00000546603 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
CPNE8-204ENST00000546603 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
CPNE8-204ENST00000546603 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
CPNE8-204ENST00000546603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
CPNE8-204ENST00000546603 SLC39A7Q92504 469 aa16.29■□□□□ 0.2
CPNE8-204ENST00000546603 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
CPNE8-204ENST00000546603 C7P10643 843 aa16.26■□□□□ 0.19
CPNE8-204ENST00000546603 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
CPNE8-204ENST00000546603 IER5LQ5T953 404 aa16.24■□□□□ 0.19
CPNE8-204ENST00000546603 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
CPNE8-204ENST00000546603 STK25O00506 426 aa16.2■□□□□ 0.18
CPNE8-204ENST00000546603 METRNQ9UJH8 293 aa16.2■□□□□ 0.18
CPNE8-204ENST00000546603 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
CPNE8-204ENST00000546603 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
CPNE8-204ENST00000546603 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
CPNE8-204ENST00000546603 STK24Q9Y6E0 443 aa16.17■□□□□ 0.18
CPNE8-204ENST00000546603 SEC24BO95487 1268 aa16.14■□□□□ 0.17
CPNE8-204ENST00000546603 CHGAP10645 457 aaKnown RBP16.11■□□□□ 0.17
CPNE8-204ENST00000546603 HS6ST3Q8IZP7 471 aa16.11■□□□□ 0.17
CPNE8-204ENST00000546603 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
CPNE8-204ENST00000546603 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
CPNE8-204ENST00000546603 PLCG2P16885 1265 aa16.07■□□□□ 0.16
CPNE8-204ENST00000546603 OCEL1Q9H607 264 aa16.07■□□□□ 0.16
CPNE8-204ENST00000546603 SOX12O15370 315 aa16.06■□□□□ 0.16
CPNE8-204ENST00000546603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
CPNE8-204ENST00000546603 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
CPNE8-204ENST00000546603 POTEFA5A3E0 1075 aa16.04■□□□□ 0.16
CPNE8-204ENST00000546603 LHX8Q68G74 356 aa16■□□□□ 0.15
CPNE8-204ENST00000546603 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
CPNE8-204ENST00000546603 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
CPNE8-204ENST00000546603 PDCD7Q8N8D1 485 aaKnown RBP15.96■□□□□ 0.15
CPNE8-204ENST00000546603 NLRP6P59044 892 aa15.95■□□□□ 0.14
CPNE8-204ENST00000546603 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
CPNE8-204ENST00000546603 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
CPNE8-204ENST00000546603 MFRPQ9BY79 579 aa15.91■□□□□ 0.14
CPNE8-204ENST00000546603 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
CPNE8-204ENST00000546603 MAMSTRQ6ZN01 415 aa15.87■□□□□ 0.13
CPNE8-204ENST00000546603 FBXO22Q8NEZ5 403 aa15.87■□□□□ 0.13
CPNE8-204ENST00000546603 DPY19L2Q6NUT2 758 aa15.86■□□□□ 0.13
CPNE8-204ENST00000546603 MS4A4AQ96JQ5 239 aa15.85■□□□□ 0.13
CPNE8-204ENST00000546603 POTEJP0CG39 1038 aa15.84■□□□□ 0.13
CPNE8-204ENST00000546603 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
CPNE8-204ENST00000546603 RYDENQ9NUL5 291 aaKnown RBP15.83■□□□□ 0.12
CPNE8-204ENST00000546603 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
CPNE8-204ENST00000546603 G3V3G9 751 aa15.81■□□□□ 0.12
CPNE8-204ENST00000546603 SCUBE2Q9NQ36 999 aa15.8■□□□□ 0.12
CPNE8-204ENST00000546603 BOLA1Q9Y3E2 137 aa15.78■□□□□ 0.12
CPNE8-204ENST00000546603 OTUD5Q96G74 571 aa15.74■□□□□ 0.11
CPNE8-204ENST00000546603 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.73■□□□□ 0.11
CPNE8-204ENST00000546603 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.11
CPNE8-204ENST00000546603 TMEM121BQ9BXQ6 578 aaPredicted RBP15.71■□□□□ 0.11
CPNE8-204ENST00000546603 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
CPNE8-204ENST00000546603 GTPBP6O43824 516 aaPredicted RBP15.7■□□□□ 0.1
CPNE8-204ENST00000546603 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
CPNE8-204ENST00000546603 PPP1R37O75864 691 aa15.66■□□□□ 0.1
CPNE8-204ENST00000546603 SPRYD3Q8NCJ5 442 aa15.62■□□□□ 0.09
CPNE8-204ENST00000546603 SLAIN1Q8ND83 568 aa15.61■□□□□ 0.09
CPNE8-204ENST00000546603 PAXIP1Q6ZW49 1069 aaPredicted RBP15.55■□□□□ 0.08
CPNE8-204ENST00000546603 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
CPNE8-204ENST00000546603 TMEM92Q6UXU6 159 aa15.46■□□□□ 0.07
CPNE8-204ENST00000546603 TMC2Q8TDI7 906 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms