RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
PDE4D-226ENST00000546160 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
PDE4D-226ENST00000546160 SCAF1Q9H7N4 1312 aaKnown RBP8.5□□□□□ -1.05
PDE4D-226ENST00000546160 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE4D-226ENST00000546160 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE4D-226ENST00000546160 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
PDE4D-226ENST00000546160 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
PDE4D-226ENST00000546160 KANK1Q14678 1352 aa8.48□□□□□ -1.05
PDE4D-226ENST00000546160 ARID4BQ4LE39 1312 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-226ENST00000546160 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
PDE4D-226ENST00000546160 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
PDE4D-226ENST00000546160 EIF4G1Q04637 1599 aaKnown RBP8.47□□□□□ -1.05
PDE4D-226ENST00000546160 CEP162Q5TB80 1403 aa8.47□□□□□ -1.05
PDE4D-226ENST00000546160 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
PDE4D-226ENST00000546160 KCNH8Q96L42 1107 aa8.46□□□□□ -1.05
PDE4D-226ENST00000546160 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.05
PDE4D-226ENST00000546160 CFDP1Q9UEE9 299 aaPredicted RBP8.46□□□□□ -1.06
PDE4D-226ENST00000546160 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
PDE4D-226ENST00000546160 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
PDE4D-226ENST00000546160 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-226ENST00000546160 MYO15BQ96JP2 1530 aa8.44□□□□□ -1.06
PDE4D-226ENST00000546160 TNIKQ9UKE5 1360 aa8.44□□□□□ -1.06
PDE4D-226ENST00000546160 CCDC136Q96JN2 1154 aa8.43□□□□□ -1.06
PDE4D-226ENST00000546160 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
PDE4D-226ENST00000546160 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
PDE4D-226ENST00000546160 CHMP4BQ9H444 224 aaKnown RBP8.42□□□□□ -1.06
PDE4D-226ENST00000546160 CASC1Q6TDU7 716 aa8.42□□□□□ -1.06
PDE4D-226ENST00000546160 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
PDE4D-226ENST00000546160 WIZO95785 1651 aa8.41□□□□□ -1.06
PDE4D-226ENST00000546160 FKBP8Q14318 412 aa8.41□□□□□ -1.06
PDE4D-226ENST00000546160 KNSTRNQ9Y448 316 aa8.41□□□□□ -1.06
PDE4D-226ENST00000546160 RRP7BPQ9NSQ0 103 aa8.41□□□□□ -1.06
PDE4D-226ENST00000546160 ANP32EQ9BTT0 268 aa8.4□□□□□ -1.06
PDE4D-226ENST00000546160 CCNB3Q8WWL7 1395 aa8.4□□□□□ -1.06
PDE4D-226ENST00000546160 BECN1Q14457 450 aa8.4□□□□□ -1.07
PDE4D-226ENST00000546160 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.07
PDE4D-226ENST00000546160 A0A0G2JS52 829 aa8.39□□□□□ -1.07
PDE4D-226ENST00000546160 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
PDE4D-226ENST00000546160 NUDCQ9Y266 331 aa8.39□□□□□ -1.07
PDE4D-226ENST00000546160 CUX2O14529 1486 aa8.38□□□□□ -1.07
PDE4D-226ENST00000546160 ABCC8Q09428 1581 aa8.38□□□□□ -1.07
PDE4D-226ENST00000546160 ARHGAP35Q9NRY4 1499 aa8.38□□□□□ -1.07
PDE4D-226ENST00000546160 MS4A1P11836 297 aa8.37□□□□□ -1.07
PDE4D-226ENST00000546160 NCLP19338 710 aaKnown RBP8.37□□□□□ -1.07
PDE4D-226ENST00000546160 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-226ENST00000546160 SMARCA4P51532 1647 aa8.37□□□□□ -1.07
PDE4D-226ENST00000546160 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
PDE4D-226ENST00000546160 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
PDE4D-226ENST00000546160 POGKQ9P215 609 aa8.37□□□□□ -1.07
PDE4D-226ENST00000546160 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
PDE4D-226ENST00000546160 MAPK8IP3Q9UPT6 1336 aa8.35□□□□□ -1.07
PDE4D-226ENST00000546160 FMN1Q68DA7 1419 aa8.35□□□□□ -1.07
PDE4D-226ENST00000546160 GOLGA6L22H0YM25 854 aa8.34□□□□□ -1.07
PDE4D-226ENST00000546160 FTSJ3Q8IY81 847 aaKnown RBP8.34□□□□□ -1.07
PDE4D-226ENST00000546160 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
PDE4D-226ENST00000546160 RGL3Q3MIN7 710 aa8.34□□□□□ -1.07
PDE4D-226ENST00000546160 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
PDE4D-226ENST00000546160 CCDC88BA6NC98 1476 aa8.32□□□□□ -1.08
PDE4D-226ENST00000546160 SOGA1O94964 1423 aa8.31□□□□□ -1.08
PDE4D-226ENST00000546160 TMF1P82094 1093 aa8.31□□□□□ -1.08
PDE4D-226ENST00000546160 ZRSR1Q15695 479 aaKnown RBP8.31□□□□□ -1.08
PDE4D-226ENST00000546160 NPHP1O15259 732 aa8.31□□□□□ -1.08
PDE4D-226ENST00000546160 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
PDE4D-226ENST00000546160 GLIPR1L2Q4G1C9 344 aa8.3□□□□□ -1.08
PDE4D-226ENST00000546160 TRHP20396 242 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-226ENST00000546160 CHMP4AQ9BY43 222 aa8.29□□□□□ -1.08
PDE4D-226ENST00000546160 CCDC18Q5T9S5 1454 aa8.29□□□□□ -1.08
PDE4D-226ENST00000546160 MROH2BQ7Z745 1585 aa8.29□□□□□ -1.08
PDE4D-226ENST00000546160 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-226ENST00000546160 EIF3AQ14152 1382 aaKnown RBP8.28□□□□□ -1.08
PDE4D-226ENST00000546160 ARXQ96QS3 562 aa8.27□□□□□ -1.08
PDE4D-226ENST00000546160 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
PDE4D-226ENST00000546160 CECR2Q9BXF3 1484 aa8.27□□□□□ -1.09
PDE4D-226ENST00000546160 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
PDE4D-226ENST00000546160 SETD5Q9C0A6 1442 aa8.26□□□□□ -1.09
PDE4D-226ENST00000546160 CALD1Q05682 793 aaKnown RBP8.26□□□□□ -1.09
PDE4D-226ENST00000546160 VPS8Q8N3P4 1428 aa8.25□□□□□ -1.09
PDE4D-226ENST00000546160 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
PDE4D-226ENST00000546160 TRIM44Q96DX7 344 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-226ENST00000546160 ANKRD30AQ9BXX3 1397 aa8.24□□□□□ -1.09
PDE4D-226ENST00000546160 PLEKHG5O94827 1062 aa8.24□□□□□ -1.09
PDE4D-226ENST00000546160 HDGFL2Q7Z4V5 671 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-226ENST00000546160 LAS1LQ9Y4W2 734 aaKnown RBP8.24□□□□□ -1.09
PDE4D-226ENST00000546160 EFCAB2Q5VUJ9 269 aa8.23□□□□□ -1.09
PDE4D-226ENST00000546160 OS9Q13438 667 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-226ENST00000546160 RAPGEF2Q9Y4G8 1499 aa8.23□□□□□ -1.09
PDE4D-226ENST00000546160 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
PDE4D-226ENST00000546160 RTF1Q92541 710 aaKnown RBP8.23□□□□□ -1.09
PDE4D-226ENST00000546160 GOLGA6L6A8MZA4 724 aa8.23□□□□□ -1.09
PDE4D-226ENST00000546160 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
PDE4D-226ENST00000546160 UACAQ9BZF9 1416 aa8.22□□□□□ -1.09
PDE4D-226ENST00000546160 MCCP23508 829 aa8.21□□□□□ -1.1
PDE4D-226ENST00000546160 EID1Q9Y6B2 187 aa8.2□□□□□ -1.1
PDE4D-226ENST00000546160 U2SURPO15042 1029 aaKnown RBP8.2□□□□□ -1.1
PDE4D-226ENST00000546160 SENP3Q9H4L4 574 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-226ENST00000546160 CADPSQ9ULU8 1353 aa8.2□□□□□ -1.1
PDE4D-226ENST00000546160 MIER1Q8N108 512 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 TMX4Q9H1E5 349 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-226ENST00000546160 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
PDE4D-226ENST00000546160 ROCK2O75116 1388 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms