RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
SNHG1-225ENST00000545920 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
SNHG1-225ENST00000545920 NACADO15069 1562 aa10.3□□□□□ -0.76
SNHG1-225ENST00000545920 RB1CC1Q8TDY2 1594 aa10.3□□□□□ -0.76
SNHG1-225ENST00000545920 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-225ENST00000545920 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
SNHG1-225ENST00000545920 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
SNHG1-225ENST00000545920 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
SNHG1-225ENST00000545920 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
SNHG1-225ENST00000545920 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
SNHG1-225ENST00000545920 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
SNHG1-225ENST00000545920 LOC105371045A0A1W2PR82 267 aa10.16□□□□□ -0.78
SNHG1-225ENST00000545920 TRIM41Q8WV44 630 aa10.16□□□□□ -0.78
SNHG1-225ENST00000545920 PLCB2Q00722 1185 aa10.15□□□□□ -0.78
SNHG1-225ENST00000545920 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
SNHG1-225ENST00000545920 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-225ENST00000545920 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-225ENST00000545920 PAK3O75914 559 aaPredicted RBP10.05□□□□□ -0.8
SNHG1-225ENST00000545920 PKD2Q13563 968 aa10.04□□□□□ -0.8
SNHG1-225ENST00000545920 PELP1Q8IZL8 1130 aaKnown RBP10.04□□□□□ -0.8
SNHG1-225ENST00000545920 MROH2BQ7Z745 1585 aa10.03□□□□□ -0.8
SNHG1-225ENST00000545920 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNHG1-225ENST00000545920 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
SNHG1-225ENST00000545920 EEA1Q15075 1411 aa10□□□□□ -0.81
SNHG1-225ENST00000545920 PHF12Q96QT6 1004 aa10□□□□□ -0.81
SNHG1-225ENST00000545920 CECR2Q9BXF3 1484 aa9.99□□□□□ -0.81
SNHG1-225ENST00000545920 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
SNHG1-225ENST00000545920 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-225ENST00000545920 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
SNHG1-225ENST00000545920 WRNQ14191 1432 aaPredicted RBP eCLIP9.98□□□□□ -0.81
SNHG1-225ENST00000545920 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
SNHG1-225ENST00000545920 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
SNHG1-225ENST00000545920 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
SNHG1-225ENST00000545920 WIZO95785 1651 aa9.92□□□□□ -0.82
SNHG1-225ENST00000545920 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
SNHG1-225ENST00000545920 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
SNHG1-225ENST00000545920 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
SNHG1-225ENST00000545920 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
SNHG1-225ENST00000545920 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-225ENST00000545920 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
SNHG1-225ENST00000545920 MS4A3Q96HJ5 214 aa9.85□□□□□ -0.83
SNHG1-225ENST00000545920 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-225ENST00000545920 C7P10643 843 aa9.84□□□□□ -0.83
SNHG1-225ENST00000545920 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-225ENST00000545920 BBXQ8WY36 941 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-225ENST00000545920 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
SNHG1-225ENST00000545920 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
SNHG1-225ENST00000545920 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
SNHG1-225ENST00000545920 BCANQ96GW7 911 aa9.83□□□□□ -0.84
SNHG1-225ENST00000545920 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
SNHG1-225ENST00000545920 PEG3Q9GZU2 1588 aa9.83□□□□□ -0.84
SNHG1-225ENST00000545920 POTEMA6NI47 508 aa9.82□□□□□ -0.84
SNHG1-225ENST00000545920 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
SNHG1-225ENST00000545920 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-225ENST00000545920 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
SNHG1-225ENST00000545920 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SNHG1-225ENST00000545920 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
SNHG1-225ENST00000545920 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-225ENST00000545920 GOLGA3Q08378 1498 aa9.78□□□□□ -0.84
SNHG1-225ENST00000545920 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
SNHG1-225ENST00000545920 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-225ENST00000545920 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
SNHG1-225ENST00000545920 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-225ENST00000545920 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
SNHG1-225ENST00000545920 CEP164Q9UPV0 1460 aa9.74□□□□□ -0.85
SNHG1-225ENST00000545920 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
SNHG1-225ENST00000545920 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
SNHG1-225ENST00000545920 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-225ENST00000545920 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
SNHG1-225ENST00000545920 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
SNHG1-225ENST00000545920 KIF21BO75037 1637 aa9.72□□□□□ -0.85
SNHG1-225ENST00000545920 RGL2O15211 777 aa9.72□□□□□ -0.85
SNHG1-225ENST00000545920 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-225ENST00000545920 PAXIP1Q6ZW49 1069 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-225ENST00000545920 MIER1Q8N108 512 aa9.7□□□□□ -0.86
SNHG1-225ENST00000545920 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
SNHG1-225ENST00000545920 MYT1Q01538 1121 aa9.69□□□□□ -0.86
SNHG1-225ENST00000545920 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
SNHG1-225ENST00000545920 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
SNHG1-225ENST00000545920 SOGA1O94964 1423 aa9.68□□□□□ -0.86
SNHG1-225ENST00000545920 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
SNHG1-225ENST00000545920 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-225ENST00000545920 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
SNHG1-225ENST00000545920 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
SNHG1-225ENST00000545920 UNC13AQ9UPW8 1703 aa9.65□□□□□ -0.86
SNHG1-225ENST00000545920 TIE1P35590 1138 aa9.65□□□□□ -0.86
SNHG1-225ENST00000545920 DIEXFQ68CQ4 756 aaKnown RBP9.65□□□□□ -0.86
SNHG1-225ENST00000545920 SPRYD3Q8NCJ5 442 aa9.65□□□□□ -0.86
SNHG1-225ENST00000545920 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
SNHG1-225ENST00000545920 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-225ENST00000545920 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
SNHG1-225ENST00000545920 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-225ENST00000545920 VPS8Q8N3P4 1428 aa9.64□□□□□ -0.87
SNHG1-225ENST00000545920 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
SNHG1-225ENST00000545920 MAP3K13O43283 966 aa9.63□□□□□ -0.87
SNHG1-225ENST00000545920 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-225ENST00000545920 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
SNHG1-225ENST00000545920 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
SNHG1-225ENST00000545920 TRPC6Q9Y210 931 aa9.63□□□□□ -0.87
SNHG1-225ENST00000545920 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms