RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
ABCA13-207ENST00000544596 PRM3Q9NNZ6 103 aa10.76□□□□□ -0.69
ABCA13-207ENST00000544596 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
ABCA13-207ENST00000544596 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
ABCA13-207ENST00000544596 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
ABCA13-207ENST00000544596 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
ABCA13-207ENST00000544596 ISY1Q9ULR0 285 aaKnown RBP10.72□□□□□ -0.69
ABCA13-207ENST00000544596 GOLGA6L22H0YM25 854 aa10.72□□□□□ -0.69
ABCA13-207ENST00000544596 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
ABCA13-207ENST00000544596 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
ABCA13-207ENST00000544596 NAP1L2Q9ULW6 460 aaPredicted RBP10.72□□□□□ -0.69
ABCA13-207ENST00000544596 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
ABCA13-207ENST00000544596 CHIC2Q9UKJ5 165 aa10.7□□□□□ -0.7
ABCA13-207ENST00000544596 ARID4BQ4LE39 1312 aaPredicted RBP10.7□□□□□ -0.7
ABCA13-207ENST00000544596 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
ABCA13-207ENST00000544596 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
ABCA13-207ENST00000544596 FGD1P98174 961 aa10.68□□□□□ -0.7
ABCA13-207ENST00000544596 BECN1Q14457 450 aa10.67□□□□□ -0.7
ABCA13-207ENST00000544596 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
ABCA13-207ENST00000544596 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
ABCA13-207ENST00000544596 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
ABCA13-207ENST00000544596 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
ABCA13-207ENST00000544596 MRS2Q9HD23 443 aa10.65□□□□□ -0.7
ABCA13-207ENST00000544596 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
ABCA13-207ENST00000544596 KCNJ4P48050 445 aa10.61□□□□□ -0.71
ABCA13-207ENST00000544596 GOLGA6L6A8MZA4 724 aa10.61□□□□□ -0.71
ABCA13-207ENST00000544596 PDE4CQ08493 712 aa10.61□□□□□ -0.71
ABCA13-207ENST00000544596 TSPY4P0CV99 314 aa10.6□□□□□ -0.71
ABCA13-207ENST00000544596 TSPY10P0CW01 314 aa10.6□□□□□ -0.71
ABCA13-207ENST00000544596 FTSJ3Q8IY81 847 aaKnown RBP10.6□□□□□ -0.71
ABCA13-207ENST00000544596 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
ABCA13-207ENST00000544596 NAP1L5Q96NT1 182 aaPredicted RBP10.59□□□□□ -0.71
ABCA13-207ENST00000544596 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
ABCA13-207ENST00000544596 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
ABCA13-207ENST00000544596 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
ABCA13-207ENST00000544596 ERICH6BQ5W0A0 696 aa10.57□□□□□ -0.72
ABCA13-207ENST00000544596 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
ABCA13-207ENST00000544596 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
ABCA13-207ENST00000544596 NRDCO43847 1150 aa10.56□□□□□ -0.72
ABCA13-207ENST00000544596 CFAP53Q96M91 514 aa10.55□□□□□ -0.72
ABCA13-207ENST00000544596 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
ABCA13-207ENST00000544596 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
ABCA13-207ENST00000544596 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
ABCA13-207ENST00000544596 GOLGA6L4A6NEF3 574 aa10.55□□□□□ -0.72
ABCA13-207ENST00000544596 NOC3LQ8WTT2 800 aaKnown RBP10.54□□□□□ -0.72
ABCA13-207ENST00000544596 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
ABCA13-207ENST00000544596 SOX12O15370 315 aa10.53□□□□□ -0.72
ABCA13-207ENST00000544596 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
ABCA13-207ENST00000544596 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
ABCA13-207ENST00000544596 MAPK8IP3Q9UPT6 1336 aa10.51□□□□□ -0.73
ABCA13-207ENST00000544596 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
ABCA13-207ENST00000544596 GNL2Q13823 731 aaKnown RBP10.51□□□□□ -0.73
ABCA13-207ENST00000544596 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
ABCA13-207ENST00000544596 ABCC9O60706 1549 aa10.5□□□□□ -0.73
ABCA13-207ENST00000544596 FRAT1Q92837 279 aaPredicted RBP10.5□□□□□ -0.73
ABCA13-207ENST00000544596 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
ABCA13-207ENST00000544596 ZNF330Q9Y3S2 320 aaPredicted RBP10.49□□□□□ -0.73
ABCA13-207ENST00000544596 RGS3P49796 1198 aa10.49□□□□□ -0.73
ABCA13-207ENST00000544596 POGKQ9P215 609 aa10.48□□□□□ -0.73
ABCA13-207ENST00000544596 L1TD1Q5T7N2 865 aaKnown RBP10.48□□□□□ -0.73
ABCA13-207ENST00000544596 CHAF1AQ13111 956 aaPredicted RBP10.47□□□□□ -0.73
ABCA13-207ENST00000544596 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
ABCA13-207ENST00000544596 TMX4Q9H1E5 349 aaPredicted RBP10.46□□□□□ -0.73
ABCA13-207ENST00000544596 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
ABCA13-207ENST00000544596 KNSTRNQ9Y448 316 aa10.46□□□□□ -0.73
ABCA13-207ENST00000544596 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.74
ABCA13-207ENST00000544596 U2SURPO15042 1029 aaKnown RBP10.46□□□□□ -0.74
ABCA13-207ENST00000544596 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.74
ABCA13-207ENST00000544596 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
ABCA13-207ENST00000544596 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
ABCA13-207ENST00000544596 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
ABCA13-207ENST00000544596 RRP7BPQ9NSQ0 103 aa10.43□□□□□ -0.74
ABCA13-207ENST00000544596 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
ABCA13-207ENST00000544596 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
ABCA13-207ENST00000544596 ARID3AQ99856 593 aa10.43□□□□□ -0.74
ABCA13-207ENST00000544596 G3V3G9 751 aa10.42□□□□□ -0.74
ABCA13-207ENST00000544596 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
ABCA13-207ENST00000544596 APBB1O00213 710 aa10.41□□□□□ -0.74
ABCA13-207ENST00000544596 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
ABCA13-207ENST00000544596 MLECQ14165 292 aa10.4□□□□□ -0.75
ABCA13-207ENST00000544596 MSNP26038 577 aaKnown RBP10.39□□□□□ -0.75
ABCA13-207ENST00000544596 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
ABCA13-207ENST00000544596 MCCP23508 829 aa10.37□□□□□ -0.75
ABCA13-207ENST00000544596 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
ABCA13-207ENST00000544596 CDCA8Q53HL2 280 aa10.37□□□□□ -0.75
ABCA13-207ENST00000544596 CSB-PGBD3P0DP91 1061 aa10.37□□□□□ -0.75
ABCA13-207ENST00000544596 RASSF8Q8NHQ8 419 aa10.36□□□□□ -0.75
ABCA13-207ENST00000544596 CEP89Q96ST8 783 aa10.36□□□□□ -0.75
ABCA13-207ENST00000544596 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
ABCA13-207ENST00000544596 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
ABCA13-207ENST00000544596 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
ABCA13-207ENST00000544596 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
ABCA13-207ENST00000544596 CHMP4BQ9H444 224 aaKnown RBP10.36□□□□□ -0.75
ABCA13-207ENST00000544596 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
ABCA13-207ENST00000544596 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
ABCA13-207ENST00000544596 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
ABCA13-207ENST00000544596 SAFB2Q14151 953 aaKnown RBP eCLIP10.34□□□□□ -0.75
ABCA13-207ENST00000544596 RTF1Q92541 710 aaKnown RBP10.34□□□□□ -0.75
ABCA13-207ENST00000544596 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
ABCA13-207ENST00000544596 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms