RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
MDM2-229ENST00000543046 PKD2Q13563 968 aa11.23□□□□□ -0.61
MDM2-229ENST00000543046 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
MDM2-229ENST00000543046 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
MDM2-229ENST00000543046 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
MDM2-229ENST00000543046 ECM2O94769 699 aaPredicted RBP11.16□□□□□ -0.62
MDM2-229ENST00000543046 EVX2Q03828 476 aa11.16□□□□□ -0.62
MDM2-229ENST00000543046 PYGBP11216 843 aa11.15□□□□□ -0.62
MDM2-229ENST00000543046 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
MDM2-229ENST00000543046 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
MDM2-229ENST00000543046 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
MDM2-229ENST00000543046 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
MDM2-229ENST00000543046 RGL2O15211 777 aa11.05□□□□□ -0.64
MDM2-229ENST00000543046 MAP3K13O43283 966 aa11.05□□□□□ -0.64
MDM2-229ENST00000543046 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
MDM2-229ENST00000543046 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
MDM2-229ENST00000543046 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
MDM2-229ENST00000543046 CLCN6P51797 869 aa11□□□□□ -0.65
MDM2-229ENST00000543046 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
MDM2-229ENST00000543046 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
MDM2-229ENST00000543046 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
MDM2-229ENST00000543046 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
MDM2-229ENST00000543046 PCDHB8Q9UN66 801 aa10.98□□□□□ -0.65
MDM2-229ENST00000543046 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
MDM2-229ENST00000543046 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
MDM2-229ENST00000543046 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
MDM2-229ENST00000543046 GABBR2O75899 941 aa10.95□□□□□ -0.66
MDM2-229ENST00000543046 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
MDM2-229ENST00000543046 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
MDM2-229ENST00000543046 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
MDM2-229ENST00000543046 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
MDM2-229ENST00000543046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
MDM2-229ENST00000543046 PSEN1P49768 467 aa10.88□□□□□ -0.67
MDM2-229ENST00000543046 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
MDM2-229ENST00000543046 TIE1P35590 1138 aa10.84□□□□□ -0.67
MDM2-229ENST00000543046 STK25O00506 426 aa10.83□□□□□ -0.68
MDM2-229ENST00000543046 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
MDM2-229ENST00000543046 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
MDM2-229ENST00000543046 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
MDM2-229ENST00000543046 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
MDM2-229ENST00000543046 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
MDM2-229ENST00000543046 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
MDM2-229ENST00000543046 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
MDM2-229ENST00000543046 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
MDM2-229ENST00000543046 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
MDM2-229ENST00000543046 ATMINO43313 823 aaPredicted RBP10.76□□□□□ -0.69
MDM2-229ENST00000543046 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
MDM2-229ENST00000543046 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
MDM2-229ENST00000543046 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
MDM2-229ENST00000543046 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
MDM2-229ENST00000543046 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
MDM2-229ENST00000543046 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
MDM2-229ENST00000543046 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
MDM2-229ENST00000543046 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
MDM2-229ENST00000543046 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
MDM2-229ENST00000543046 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
MDM2-229ENST00000543046 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
MDM2-229ENST00000543046 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.64□□□□□ -0.71
MDM2-229ENST00000543046 SOX12O15370 315 aa10.63□□□□□ -0.71
MDM2-229ENST00000543046 IER5LQ5T953 404 aa10.62□□□□□ -0.71
MDM2-229ENST00000543046 SLC39A7Q92504 469 aa10.62□□□□□ -0.71
MDM2-229ENST00000543046 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
MDM2-229ENST00000543046 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
MDM2-229ENST00000543046 C7P10643 843 aa10.59□□□□□ -0.71
MDM2-229ENST00000543046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.715e-13■□□□□ 9.3
MDM2-229ENST00000543046 NLRP6P59044 892 aa10.58□□□□□ -0.72
MDM2-229ENST00000543046 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
MDM2-229ENST00000543046 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
MDM2-229ENST00000543046 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
MDM2-229ENST00000543046 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
MDM2-229ENST00000543046 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
MDM2-229ENST00000543046 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
MDM2-229ENST00000543046 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
MDM2-229ENST00000543046 SEC24BO95487 1268 aa10.55□□□□□ -0.72
MDM2-229ENST00000543046 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
MDM2-229ENST00000543046 CFAP44Q96MT7 982 aa10.55□□□□□ -0.72
MDM2-229ENST00000543046 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
MDM2-229ENST00000543046 PLCG2P16885 1265 aa10.54□□□□□ -0.72
MDM2-229ENST00000543046 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
MDM2-229ENST00000543046 COLQQ9Y215 455 aaPredicted RBP10.54□□□□□ -0.72
MDM2-229ENST00000543046 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
MDM2-229ENST00000543046 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
MDM2-229ENST00000543046 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
MDM2-229ENST00000543046 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
MDM2-229ENST00000543046 PPP1R37O75864 691 aa10.47□□□□□ -0.73
MDM2-229ENST00000543046 L3MBTL3Q96JM7 780 aaPredicted RBP10.41□□□□□ -0.74
MDM2-229ENST00000543046 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
MDM2-229ENST00000543046 G3V3G9 751 aa10.4□□□□□ -0.74
MDM2-229ENST00000543046 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
MDM2-229ENST00000543046 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
MDM2-229ENST00000543046 TMEM121BQ9BXQ6 578 aaPredicted RBP10.37□□□□□ -0.75
MDM2-229ENST00000543046 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
MDM2-229ENST00000543046 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
MDM2-229ENST00000543046 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
MDM2-229ENST00000543046 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
MDM2-229ENST00000543046 LHX8Q68G74 356 aa10.3□□□□□ -0.76
MDM2-229ENST00000543046 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
MDM2-229ENST00000543046 MAMSTRQ6ZN01 415 aa10.27□□□□□ -0.77
MDM2-229ENST00000543046 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
MDM2-229ENST00000543046 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms