RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
GTF2H3-210ENST00000543005 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
GTF2H3-210ENST00000543005 POTEMA6NI47 508 aa12.89□□□□□ -0.35
GTF2H3-210ENST00000543005 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
GTF2H3-210ENST00000543005 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
GTF2H3-210ENST00000543005 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
GTF2H3-210ENST00000543005 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
GTF2H3-210ENST00000543005 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
GTF2H3-210ENST00000543005 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
GTF2H3-210ENST00000543005 TSPYL2Q9H2G4 693 aaPredicted RBP12.78□□□□□ -0.36
GTF2H3-210ENST00000543005 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
GTF2H3-210ENST00000543005 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
GTF2H3-210ENST00000543005 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
GTF2H3-210ENST00000543005 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
GTF2H3-210ENST00000543005 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
GTF2H3-210ENST00000543005 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
GTF2H3-210ENST00000543005 TIE1P35590 1138 aa12.68□□□□□ -0.38
GTF2H3-210ENST00000543005 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
GTF2H3-210ENST00000543005 MAP3K13O43283 966 aa12.64□□□□□ -0.39
GTF2H3-210ENST00000543005 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
GTF2H3-210ENST00000543005 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
GTF2H3-210ENST00000543005 MIER1Q8N108 512 aa12.59□□□□□ -0.39
GTF2H3-210ENST00000543005 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
GTF2H3-210ENST00000543005 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
GTF2H3-210ENST00000543005 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
GTF2H3-210ENST00000543005 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
GTF2H3-210ENST00000543005 IER5LQ5T953 404 aa12.53□□□□□ -0.4
GTF2H3-210ENST00000543005 SEC24BO95487 1268 aa12.49□□□□□ -0.41
GTF2H3-210ENST00000543005 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
GTF2H3-210ENST00000543005 NUBP1P53384 320 aa12.45□□□□□ -0.42
GTF2H3-210ENST00000543005 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
GTF2H3-210ENST00000543005 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
GTF2H3-210ENST00000543005 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
GTF2H3-210ENST00000543005 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
GTF2H3-210ENST00000543005 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
GTF2H3-210ENST00000543005 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
GTF2H3-210ENST00000543005 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
GTF2H3-210ENST00000543005 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
GTF2H3-210ENST00000543005 ST18O60284 1047 aa12.31□□□□□ -0.44
GTF2H3-210ENST00000543005 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
GTF2H3-210ENST00000543005 PLCG2P16885 1265 aa12.3□□□□□ -0.44
GTF2H3-210ENST00000543005 OCEL1Q9H607 264 aa12.23□□□□□ -0.45
GTF2H3-210ENST00000543005 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
GTF2H3-210ENST00000543005 SNPHO15079 494 aa12.15□□□□□ -0.46
GTF2H3-210ENST00000543005 PYGBP11216 843 aa12.14□□□□□ -0.47
GTF2H3-210ENST00000543005 DCAF8Q5TAQ9 597 aa12.14□□□□□ -0.47
GTF2H3-210ENST00000543005 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
GTF2H3-210ENST00000543005 FKBP8Q14318 412 aa12.1□□□□□ -0.47
GTF2H3-210ENST00000543005 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
GTF2H3-210ENST00000543005 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
GTF2H3-210ENST00000543005 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
GTF2H3-210ENST00000543005 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
GTF2H3-210ENST00000543005 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
GTF2H3-210ENST00000543005 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
GTF2H3-210ENST00000543005 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
GTF2H3-210ENST00000543005 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
GTF2H3-210ENST00000543005 GSE1Q14687 1217 aa12□□□□□ -0.49
GTF2H3-210ENST00000543005 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
GTF2H3-210ENST00000543005 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
GTF2H3-210ENST00000543005 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
GTF2H3-210ENST00000543005 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
GTF2H3-210ENST00000543005 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
GTF2H3-210ENST00000543005 EMP3P54852 163 aa11.92□□□□□ -0.5
GTF2H3-210ENST00000543005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
GTF2H3-210ENST00000543005 PSEN1P49768 467 aa11.9□□□□□ -0.5
GTF2H3-210ENST00000543005 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
GTF2H3-210ENST00000543005 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
GTF2H3-210ENST00000543005 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
GTF2H3-210ENST00000543005 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
GTF2H3-210ENST00000543005 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
GTF2H3-210ENST00000543005 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
GTF2H3-210ENST00000543005 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
GTF2H3-210ENST00000543005 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
GTF2H3-210ENST00000543005 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
GTF2H3-210ENST00000543005 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
GTF2H3-210ENST00000543005 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
GTF2H3-210ENST00000543005 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
GTF2H3-210ENST00000543005 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
GTF2H3-210ENST00000543005 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
GTF2H3-210ENST00000543005 G3V3G9 751 aa11.7□□□□□ -0.54
GTF2H3-210ENST00000543005 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
GTF2H3-210ENST00000543005 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
GTF2H3-210ENST00000543005 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
GTF2H3-210ENST00000543005 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
GTF2H3-210ENST00000543005 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
GTF2H3-210ENST00000543005 ERBB3P21860 1342 aa11.61□□□□□ -0.55
GTF2H3-210ENST00000543005 RIMBP2O15034 1052 aa11.59□□□□□ -0.55
GTF2H3-210ENST00000543005 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
GTF2H3-210ENST00000543005 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
GTF2H3-210ENST00000543005 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
GTF2H3-210ENST00000543005 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
GTF2H3-210ENST00000543005 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
GTF2H3-210ENST00000543005 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
GTF2H3-210ENST00000543005 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
GTF2H3-210ENST00000543005 ZNF687Q8N1G0 1237 aa11.52□□□□□ -0.57
GTF2H3-210ENST00000543005 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
GTF2H3-210ENST00000543005 SOX12O15370 315 aa11.49□□□□□ -0.57
GTF2H3-210ENST00000543005 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
GTF2H3-210ENST00000543005 PTGER2P43116 358 aa11.46□□□□□ -0.57
GTF2H3-210ENST00000543005 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms