RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
C12orf56-205ENST00000542397 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
C12orf56-205ENST00000542397 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
C12orf56-205ENST00000542397 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
C12orf56-205ENST00000542397 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
C12orf56-205ENST00000542397 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
C12orf56-205ENST00000542397 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
C12orf56-205ENST00000542397 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
C12orf56-205ENST00000542397 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
C12orf56-205ENST00000542397 NUBP1P53384 320 aa12.16□□□□□ -0.46
C12orf56-205ENST00000542397 LCE2DQ5TA82 110 aaPredicted RBP12.1□□□□□ -0.47
C12orf56-205ENST00000542397 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
C12orf56-205ENST00000542397 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
C12orf56-205ENST00000542397 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
C12orf56-205ENST00000542397 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
C12orf56-205ENST00000542397 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
C12orf56-205ENST00000542397 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
C12orf56-205ENST00000542397 MAP3K13O43283 966 aa12.02□□□□□ -0.49
C12orf56-205ENST00000542397 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
C12orf56-205ENST00000542397 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
C12orf56-205ENST00000542397 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
C12orf56-205ENST00000542397 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
C12orf56-205ENST00000542397 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
C12orf56-205ENST00000542397 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
C12orf56-205ENST00000542397 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
C12orf56-205ENST00000542397 GSE1Q14687 1217 aa11.93□□□□□ -0.5
C12orf56-205ENST00000542397 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
C12orf56-205ENST00000542397 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
C12orf56-205ENST00000542397 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
C12orf56-205ENST00000542397 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
C12orf56-205ENST00000542397 PYGBP11216 843 aa11.9□□□□□ -0.5
C12orf56-205ENST00000542397 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
C12orf56-205ENST00000542397 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
C12orf56-205ENST00000542397 C7P10643 843 aa11.89□□□□□ -0.51
C12orf56-205ENST00000542397 TIE1P35590 1138 aa11.88□□□□□ -0.51
C12orf56-205ENST00000542397 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
C12orf56-205ENST00000542397 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
C12orf56-205ENST00000542397 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
C12orf56-205ENST00000542397 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
C12orf56-205ENST00000542397 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
C12orf56-205ENST00000542397 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
C12orf56-205ENST00000542397 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
C12orf56-205ENST00000542397 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
C12orf56-205ENST00000542397 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
C12orf56-205ENST00000542397 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
C12orf56-205ENST00000542397 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
C12orf56-205ENST00000542397 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
C12orf56-205ENST00000542397 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
C12orf56-205ENST00000542397 IER5LQ5T953 404 aa11.68□□□□□ -0.54
C12orf56-205ENST00000542397 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
C12orf56-205ENST00000542397 SEC24BO95487 1268 aa11.65□□□□□ -0.54
C12orf56-205ENST00000542397 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
C12orf56-205ENST00000542397 PSEN1P49768 467 aa11.63□□□□□ -0.55
C12orf56-205ENST00000542397 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
C12orf56-205ENST00000542397 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
C12orf56-205ENST00000542397 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
C12orf56-205ENST00000542397 PLCG2P16885 1265 aa11.56□□□□□ -0.56
C12orf56-205ENST00000542397 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
C12orf56-205ENST00000542397 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
C12orf56-205ENST00000542397 ST18O60284 1047 aa11.52□□□□□ -0.57
C12orf56-205ENST00000542397 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
C12orf56-205ENST00000542397 RNF25Q96BH1 459 aaPredicted RBP11.52□□□□□ -0.57
C12orf56-205ENST00000542397 RIOK3O14730 519 aaKnown RBP11.51□□□□□ -0.57
C12orf56-205ENST00000542397 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
C12orf56-205ENST00000542397 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
C12orf56-205ENST00000542397 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
C12orf56-205ENST00000542397 PKD2Q13563 968 aa11.45□□□□□ -0.58
C12orf56-205ENST00000542397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.58
C12orf56-205ENST00000542397 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
C12orf56-205ENST00000542397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
C12orf56-205ENST00000542397 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
C12orf56-205ENST00000542397 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
C12orf56-205ENST00000542397 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
C12orf56-205ENST00000542397 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
C12orf56-205ENST00000542397 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
C12orf56-205ENST00000542397 RGL2O15211 777 aa11.36□□□□□ -0.59
C12orf56-205ENST00000542397 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
C12orf56-205ENST00000542397 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
C12orf56-205ENST00000542397 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
C12orf56-205ENST00000542397 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
C12orf56-205ENST00000542397 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
C12orf56-205ENST00000542397 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
C12orf56-205ENST00000542397 SOX12O15370 315 aa11.31□□□□□ -0.6
C12orf56-205ENST00000542397 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
C12orf56-205ENST00000542397 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
C12orf56-205ENST00000542397 STK25O00506 426 aa11.28□□□□□ -0.6
C12orf56-205ENST00000542397 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
C12orf56-205ENST00000542397 G3V3G9 751 aa11.26□□□□□ -0.61
C12orf56-205ENST00000542397 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
C12orf56-205ENST00000542397 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
C12orf56-205ENST00000542397 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
C12orf56-205ENST00000542397 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
C12orf56-205ENST00000542397 SNPHO15079 494 aa11.21□□□□□ -0.61
C12orf56-205ENST00000542397 NLRP6P59044 892 aa11.2□□□□□ -0.62
C12orf56-205ENST00000542397 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
C12orf56-205ENST00000542397 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
C12orf56-205ENST00000542397 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
C12orf56-205ENST00000542397 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
C12orf56-205ENST00000542397 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
C12orf56-205ENST00000542397 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms