RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
GTF2H3-209ENST00000542279 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
GTF2H3-209ENST00000542279 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
GTF2H3-209ENST00000542279 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
GTF2H3-209ENST00000542279 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
GTF2H3-209ENST00000542279 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
GTF2H3-209ENST00000542279 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
GTF2H3-209ENST00000542279 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
GTF2H3-209ENST00000542279 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
GTF2H3-209ENST00000542279 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
GTF2H3-209ENST00000542279 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
GTF2H3-209ENST00000542279 SEC24BO95487 1268 aa10.97□□□□□ -0.65
GTF2H3-209ENST00000542279 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
GTF2H3-209ENST00000542279 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
GTF2H3-209ENST00000542279 MIER1Q8N108 512 aa10.96□□□□□ -0.65
GTF2H3-209ENST00000542279 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
GTF2H3-209ENST00000542279 TIE1P35590 1138 aa10.92□□□□□ -0.66
GTF2H3-209ENST00000542279 BMP2KQ9NSY1 1161 aaPredicted RBP10.91□□□□□ -0.66
GTF2H3-209ENST00000542279 MAP3K13O43283 966 aa10.89□□□□□ -0.67
GTF2H3-209ENST00000542279 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
GTF2H3-209ENST00000542279 PROM2Q8N271 834 aa10.82□□□□□ -0.68
GTF2H3-209ENST00000542279 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
GTF2H3-209ENST00000542279 LCE2DQ5TA82 110 aaPredicted RBP10.81□□□□□ -0.68
GTF2H3-209ENST00000542279 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
GTF2H3-209ENST00000542279 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
GTF2H3-209ENST00000542279 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
GTF2H3-209ENST00000542279 IER5LQ5T953 404 aa10.8□□□□□ -0.68
GTF2H3-209ENST00000542279 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
GTF2H3-209ENST00000542279 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
GTF2H3-209ENST00000542279 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
GTF2H3-209ENST00000542279 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
GTF2H3-209ENST00000542279 TRIM35Q9UPQ4 493 aa10.78□□□□□ -0.68
GTF2H3-209ENST00000542279 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
GTF2H3-209ENST00000542279 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
GTF2H3-209ENST00000542279 PLCG2P16885 1265 aa10.73□□□□□ -0.69
GTF2H3-209ENST00000542279 FAM212AQ96EL1 285 aa10.68□□□□□ -0.7
GTF2H3-209ENST00000542279 TMEM106CQ9BVX2 250 aa10.68□□□□□ -0.7
GTF2H3-209ENST00000542279 SNPHO15079 494 aa10.66□□□□□ -0.7
GTF2H3-209ENST00000542279 ST18O60284 1047 aa10.66□□□□□ -0.7
GTF2H3-209ENST00000542279 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
GTF2H3-209ENST00000542279 NUBP1P53384 320 aa10.6□□□□□ -0.71
GTF2H3-209ENST00000542279 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
GTF2H3-209ENST00000542279 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
GTF2H3-209ENST00000542279 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
GTF2H3-209ENST00000542279 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
GTF2H3-209ENST00000542279 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
GTF2H3-209ENST00000542279 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
GTF2H3-209ENST00000542279 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
GTF2H3-209ENST00000542279 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
GTF2H3-209ENST00000542279 PYGBP11216 843 aa10.48□□□□□ -0.73
GTF2H3-209ENST00000542279 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
GTF2H3-209ENST00000542279 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
GTF2H3-209ENST00000542279 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
GTF2H3-209ENST00000542279 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
GTF2H3-209ENST00000542279 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
GTF2H3-209ENST00000542279 EMP3P54852 163 aa10.41□□□□□ -0.74
GTF2H3-209ENST00000542279 FBXO3Q9UK99 471 aa10.39□□□□□ -0.75
GTF2H3-209ENST00000542279 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
GTF2H3-209ENST00000542279 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
GTF2H3-209ENST00000542279 GSE1Q14687 1217 aa10.37□□□□□ -0.75
GTF2H3-209ENST00000542279 G3V3G9 751 aa10.36□□□□□ -0.75
GTF2H3-209ENST00000542279 FKBP8Q14318 412 aa10.35□□□□□ -0.75
GTF2H3-209ENST00000542279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.754e-9■■■■■ 35
GTF2H3-209ENST00000542279 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
GTF2H3-209ENST00000542279 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
GTF2H3-209ENST00000542279 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
GTF2H3-209ENST00000542279 PSEN1P49768 467 aa10.26□□□□□ -0.77
GTF2H3-209ENST00000542279 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
GTF2H3-209ENST00000542279 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
GTF2H3-209ENST00000542279 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
GTF2H3-209ENST00000542279 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
GTF2H3-209ENST00000542279 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
GTF2H3-209ENST00000542279 ERBB3P21860 1342 aa10.18□□□□□ -0.78
GTF2H3-209ENST00000542279 RIMBP2O15034 1052 aa10.17□□□□□ -0.78
GTF2H3-209ENST00000542279 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
GTF2H3-209ENST00000542279 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
GTF2H3-209ENST00000542279 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
GTF2H3-209ENST00000542279 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
GTF2H3-209ENST00000542279 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
GTF2H3-209ENST00000542279 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
GTF2H3-209ENST00000542279 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
GTF2H3-209ENST00000542279 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
GTF2H3-209ENST00000542279 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
GTF2H3-209ENST00000542279 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
GTF2H3-209ENST00000542279 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
GTF2H3-209ENST00000542279 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
GTF2H3-209ENST00000542279 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
GTF2H3-209ENST00000542279 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
GTF2H3-209ENST00000542279 VARS2Q5ST30 1063 aaKnown RBP10.03□□□□□ -0.8
GTF2H3-209ENST00000542279 PTGER2P43116 358 aa9.99□□□□□ -0.81
GTF2H3-209ENST00000542279 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
GTF2H3-209ENST00000542279 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
GTF2H3-209ENST00000542279 EFCAB3Q8N7B9 438 aa9.94□□□□□ -0.82
GTF2H3-209ENST00000542279 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
GTF2H3-209ENST00000542279 ANKRD13DQ6ZTN6 518 aa9.93□□□□□ -0.82
GTF2H3-209ENST00000542279 SOX12O15370 315 aa9.89□□□□□ -0.83
GTF2H3-209ENST00000542279 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
GTF2H3-209ENST00000542279 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
GTF2H3-209ENST00000542279 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
GTF2H3-209ENST00000542279 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms