RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
COL6A4P2-206ENST00000542114 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
COL6A4P2-206ENST00000542114 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
COL6A4P2-206ENST00000542114 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
COL6A4P2-206ENST00000542114 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
COL6A4P2-206ENST00000542114 CLCN6P51797 869 aa10.98□□□□□ -0.65
COL6A4P2-206ENST00000542114 PYGBP11216 843 aa10.97□□□□□ -0.65
COL6A4P2-206ENST00000542114 GABBR2O75899 941 aa10.94□□□□□ -0.66
COL6A4P2-206ENST00000542114 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
COL6A4P2-206ENST00000542114 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
COL6A4P2-206ENST00000542114 MAP3K13O43283 966 aa10.92□□□□□ -0.66
COL6A4P2-206ENST00000542114 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
COL6A4P2-206ENST00000542114 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
COL6A4P2-206ENST00000542114 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
COL6A4P2-206ENST00000542114 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
COL6A4P2-206ENST00000542114 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P2-206ENST00000542114 PKD2Q13563 968 aa10.87□□□□□ -0.67
COL6A4P2-206ENST00000542114 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
COL6A4P2-206ENST00000542114 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P2-206ENST00000542114 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P2-206ENST00000542114 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
COL6A4P2-206ENST00000542114 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
COL6A4P2-206ENST00000542114 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
COL6A4P2-206ENST00000542114 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
COL6A4P2-206ENST00000542114 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
COL6A4P2-206ENST00000542114 RGL2O15211 777 aa10.74□□□□□ -0.69
COL6A4P2-206ENST00000542114 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
COL6A4P2-206ENST00000542114 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
COL6A4P2-206ENST00000542114 TIE1P35590 1138 aa10.73□□□□□ -0.69
COL6A4P2-206ENST00000542114 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
COL6A4P2-206ENST00000542114 PSEN1P49768 467 aa10.72□□□□□ -0.69
COL6A4P2-206ENST00000542114 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
COL6A4P2-206ENST00000542114 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
COL6A4P2-206ENST00000542114 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P2-206ENST00000542114 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
COL6A4P2-206ENST00000542114 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
COL6A4P2-206ENST00000542114 ATMINO43313 823 aaPredicted RBP10.68□□□□□ -0.7
COL6A4P2-206ENST00000542114 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
COL6A4P2-206ENST00000542114 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
COL6A4P2-206ENST00000542114 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
COL6A4P2-206ENST00000542114 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P2-206ENST00000542114 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P2-206ENST00000542114 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P2-206ENST00000542114 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
COL6A4P2-206ENST00000542114 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
COL6A4P2-206ENST00000542114 STK25O00506 426 aa10.6□□□□□ -0.71
COL6A4P2-206ENST00000542114 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
COL6A4P2-206ENST00000542114 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
COL6A4P2-206ENST00000542114 SLC39A7Q92504 469 aa10.58□□□□□ -0.72
COL6A4P2-206ENST00000542114 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
COL6A4P2-206ENST00000542114 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
COL6A4P2-206ENST00000542114 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
COL6A4P2-206ENST00000542114 CHGAP10645 457 aaKnown RBP10.56□□□□□ -0.72
COL6A4P2-206ENST00000542114 C7P10643 843 aa10.55□□□□□ -0.72
COL6A4P2-206ENST00000542114 IER5LQ5T953 404 aa10.53□□□□□ -0.72
COL6A4P2-206ENST00000542114 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
COL6A4P2-206ENST00000542114 SEC24BO95487 1268 aa10.52□□□□□ -0.73
COL6A4P2-206ENST00000542114 HS6ST3Q8IZP7 471 aa10.5□□□□□ -0.73
COL6A4P2-206ENST00000542114 EFCAB3Q8N7B9 438 aa10.5□□□□□ -0.73
COL6A4P2-206ENST00000542114 PLCG2P16885 1265 aa10.47□□□□□ -0.73
COL6A4P2-206ENST00000542114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL6A4P2-206ENST00000542114 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
COL6A4P2-206ENST00000542114 SOX12O15370 315 aa10.45□□□□□ -0.74
COL6A4P2-206ENST00000542114 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
COL6A4P2-206ENST00000542114 COLQQ9Y215 455 aaPredicted RBP10.43□□□□□ -0.74
COL6A4P2-206ENST00000542114 POTEFA5A3E0 1075 aa10.4□□□□□ -0.74
COL6A4P2-206ENST00000542114 NLRP6P59044 892 aa10.4□□□□□ -0.74
COL6A4P2-206ENST00000542114 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
COL6A4P2-206ENST00000542114 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
COL6A4P2-206ENST00000542114 LHX8Q68G74 356 aa10.36□□□□□ -0.75
COL6A4P2-206ENST00000542114 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
COL6A4P2-206ENST00000542114 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
COL6A4P2-206ENST00000542114 MFRPQ9BY79 579 aa10.36□□□□□ -0.75
COL6A4P2-206ENST00000542114 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P2-206ENST00000542114 G3V3G9 751 aa10.34□□□□□ -0.75
COL6A4P2-206ENST00000542114 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P2-206ENST00000542114 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 NKX1-1Q15270 411 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P2-206ENST00000542114 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
COL6A4P2-206ENST00000542114 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
COL6A4P2-206ENST00000542114 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
COL6A4P2-206ENST00000542114 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
COL6A4P2-206ENST00000542114 POTEJP0CG39 1038 aa10.26□□□□□ -0.77
COL6A4P2-206ENST00000542114 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P2-206ENST00000542114 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
COL6A4P2-206ENST00000542114 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
COL6A4P2-206ENST00000542114 PPP1R37O75864 691 aa10.23□□□□□ -0.77
COL6A4P2-206ENST00000542114 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P2-206ENST00000542114 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
COL6A4P2-206ENST00000542114 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
COL6A4P2-206ENST00000542114 MICALL2Q8IY33 904 aa10.21□□□□□ -0.77
COL6A4P2-206ENST00000542114 OTUD5Q96G74 571 aa10.2□□□□□ -0.78
COL6A4P2-206ENST00000542114 TMEM121BQ9BXQ6 578 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P2-206ENST00000542114 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
COL6A4P2-206ENST00000542114 TMC2Q8TDI7 906 aa10.08□□□□□ -0.8
COL6A4P2-206ENST00000542114 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms