RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
C12orf56-204ENST00000541802 POTEMA6NI47 508 aa15.67■□□□□ 0.1
C12orf56-204ENST00000541802 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
C12orf56-204ENST00000541802 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
C12orf56-204ENST00000541802 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
C12orf56-204ENST00000541802 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
C12orf56-204ENST00000541802 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
C12orf56-204ENST00000541802 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
C12orf56-204ENST00000541802 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
C12orf56-204ENST00000541802 ASTLQ6HA08 431 aaPredicted RBP15.51■□□□□ 0.07
C12orf56-204ENST00000541802 METRNQ9UJH8 293 aa15.51■□□□□ 0.07
C12orf56-204ENST00000541802 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
C12orf56-204ENST00000541802 SLC39A7Q92504 469 aa15.48■□□□□ 0.07
C12orf56-204ENST00000541802 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
C12orf56-204ENST00000541802 C7P10643 843 aa15.46■□□□□ 0.07
C12orf56-204ENST00000541802 SPOCK2Q92563 424 aa15.46■□□□□ 0.07
C12orf56-204ENST00000541802 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
C12orf56-204ENST00000541802 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
C12orf56-204ENST00000541802 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
C12orf56-204ENST00000541802 MAMSTRQ6ZN01 415 aa15.41■□□□□ 0.06
C12orf56-204ENST00000541802 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
C12orf56-204ENST00000541802 ATN1P54259 1190 aaPredicted RBP15.3■□□□□ 0.04
C12orf56-204ENST00000541802 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
C12orf56-204ENST00000541802 LCE2DQ5TA82 110 aaPredicted RBP15.29■□□□□ 0.04
C12orf56-204ENST00000541802 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
C12orf56-204ENST00000541802 PKD2Q13563 968 aa15.26■□□□□ 0.03
C12orf56-204ENST00000541802 CCDC61Q9Y6R9 512 aa15.26■□□□□ 0.03
C12orf56-204ENST00000541802 NUBP1P53384 320 aa15.23■□□□□ 0.03
C12orf56-204ENST00000541802 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
C12orf56-204ENST00000541802 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
C12orf56-204ENST00000541802 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
C12orf56-204ENST00000541802 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
C12orf56-204ENST00000541802 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
C12orf56-204ENST00000541802 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
C12orf56-204ENST00000541802 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
C12orf56-204ENST00000541802 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
C12orf56-204ENST00000541802 MAP3K13O43283 966 aa15.1■□□□□ 0.01
C12orf56-204ENST00000541802 TIE1P35590 1138 aa15.1■□□□□ 0.01
C12orf56-204ENST00000541802 GSE1Q14687 1217 aa15.1■□□□□ 0.01
C12orf56-204ENST00000541802 FAM212AQ96EL1 285 aa15.09■□□□□ 0.01
C12orf56-204ENST00000541802 SEC24BO95487 1268 aa15.04■□□□□ -0
C12orf56-204ENST00000541802 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
C12orf56-204ENST00000541802 COLQQ9Y215 455 aaPredicted RBP15.03■□□□□ -0
C12orf56-204ENST00000541802 TTLL13PA6NNM8 815 aa15□□□□□ -0.01
C12orf56-204ENST00000541802 RGL2O15211 777 aa14.98□□□□□ -0.01
C12orf56-204ENST00000541802 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
C12orf56-204ENST00000541802 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
C12orf56-204ENST00000541802 PYGBP11216 843 aa14.92□□□□□ -0.02
C12orf56-204ENST00000541802 IER5LQ5T953 404 aa14.91□□□□□ -0.02
C12orf56-204ENST00000541802 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
C12orf56-204ENST00000541802 SGIP1Q9BQI5 828 aa14.88□□□□□ -0.03
C12orf56-204ENST00000541802 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
C12orf56-204ENST00000541802 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
C12orf56-204ENST00000541802 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
C12orf56-204ENST00000541802 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
C12orf56-204ENST00000541802 ST18O60284 1047 aa14.83□□□□□ -0.04
C12orf56-204ENST00000541802 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
C12orf56-204ENST00000541802 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
C12orf56-204ENST00000541802 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
C12orf56-204ENST00000541802 CHGAP10645 457 aaKnown RBP14.73□□□□□ -0.05
C12orf56-204ENST00000541802 PLCG2P16885 1265 aa14.73□□□□□ -0.05
C12orf56-204ENST00000541802 PCDHB8Q9UN66 801 aa14.69□□□□□ -0.06
C12orf56-204ENST00000541802 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
C12orf56-204ENST00000541802 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
C12orf56-204ENST00000541802 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
C12orf56-204ENST00000541802 ZNF467Q7Z7K2 595 aaPredicted RBP14.66□□□□□ -0.06
C12orf56-204ENST00000541802 MMRN1Q13201 1228 aa14.63□□□□□ -0.07
C12orf56-204ENST00000541802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
C12orf56-204ENST00000541802 SPNS2Q8IVW8 549 aa14.62□□□□□ -0.07
C12orf56-204ENST00000541802 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
C12orf56-204ENST00000541802 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
C12orf56-204ENST00000541802 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
C12orf56-204ENST00000541802 STK25O00506 426 aa14.61□□□□□ -0.07
C12orf56-204ENST00000541802 TMEM121BQ9BXQ6 578 aaPredicted RBP14.61□□□□□ -0.07
C12orf56-204ENST00000541802 OCEL1Q9H607 264 aa14.59□□□□□ -0.07
C12orf56-204ENST00000541802 SNPHO15079 494 aa14.58□□□□□ -0.08
C12orf56-204ENST00000541802 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
C12orf56-204ENST00000541802 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
C12orf56-204ENST00000541802 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
C12orf56-204ENST00000541802 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
C12orf56-204ENST00000541802 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
C12orf56-204ENST00000541802 PSEN1P49768 467 aa14.53□□□□□ -0.08
C12orf56-204ENST00000541802 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
C12orf56-204ENST00000541802 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
C12orf56-204ENST00000541802 MARVELD3Q96A59 401 aa14.52□□□□□ -0.09
C12orf56-204ENST00000541802 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
C12orf56-204ENST00000541802 CFAP44Q96MT7 982 aa14.47□□□□□ -0.09
C12orf56-204ENST00000541802 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
C12orf56-204ENST00000541802 DNAJC5Q9H3Z4 198 aa14.45□□□□□ -0.1
C12orf56-204ENST00000541802 SPRYD3Q8NCJ5 442 aa14.42□□□□□ -0.1
C12orf56-204ENST00000541802 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
C12orf56-204ENST00000541802 EMP3P54852 163 aa14.37□□□□□ -0.11
C12orf56-204ENST00000541802 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
C12orf56-204ENST00000541802 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
C12orf56-204ENST00000541802 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
C12orf56-204ENST00000541802 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
C12orf56-204ENST00000541802 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
C12orf56-204ENST00000541802 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
C12orf56-204ENST00000541802 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
C12orf56-204ENST00000541802 HS3ST6Q96QI5 342 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms