RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CLCN6P51797 869 aa11.51□□□□□ -0.57
SNHG1-217ENST00000541578 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
SNHG1-217ENST00000541578 GABBR2O75899 941 aa11.5□□□□□ -0.57
SNHG1-217ENST00000541578 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
SNHG1-217ENST00000541578 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
SNHG1-217ENST00000541578 GSE1Q14687 1217 aa11.46□□□□□ -0.57
SNHG1-217ENST00000541578 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
SNHG1-217ENST00000541578 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-217ENST00000541578 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-217ENST00000541578 MAP3K13O43283 966 aa11.37□□□□□ -0.59
SNHG1-217ENST00000541578 PYGBP11216 843 aa11.36□□□□□ -0.59
SNHG1-217ENST00000541578 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
SNHG1-217ENST00000541578 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
SNHG1-217ENST00000541578 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
SNHG1-217ENST00000541578 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-217ENST00000541578 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
SNHG1-217ENST00000541578 TRIM41Q8WV44 630 aa11.29□□□□□ -0.6
SNHG1-217ENST00000541578 IFNL1Q8IU54 200 aa11.27□□□□□ -0.61
SNHG1-217ENST00000541578 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
SNHG1-217ENST00000541578 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
SNHG1-217ENST00000541578 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-217ENST00000541578 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
SNHG1-217ENST00000541578 TIE1P35590 1138 aa11.19□□□□□ -0.62
SNHG1-217ENST00000541578 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-217ENST00000541578 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-217ENST00000541578 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
SNHG1-217ENST00000541578 PKD2Q13563 968 aa11.17□□□□□ -0.62
SNHG1-217ENST00000541578 ECM2O94769 699 aaPredicted RBP11.16□□□□□ -0.62
SNHG1-217ENST00000541578 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
SNHG1-217ENST00000541578 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
SNHG1-217ENST00000541578 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
SNHG1-217ENST00000541578 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
SNHG1-217ENST00000541578 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
SNHG1-217ENST00000541578 PSEN1P49768 467 aa11.11□□□□□ -0.63
SNHG1-217ENST00000541578 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
SNHG1-217ENST00000541578 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
SNHG1-217ENST00000541578 C7P10643 843 aa11.06□□□□□ -0.64
SNHG1-217ENST00000541578 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
SNHG1-217ENST00000541578 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
SNHG1-217ENST00000541578 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
SNHG1-217ENST00000541578 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
SNHG1-217ENST00000541578 RGL2O15211 777 aa11.03□□□□□ -0.64
SNHG1-217ENST00000541578 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
SNHG1-217ENST00000541578 GOLGA2Q08379 1002 aa11.01□□□□□ -0.65
SNHG1-217ENST00000541578 IER5LQ5T953 404 aa11.01□□□□□ -0.65
SNHG1-217ENST00000541578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-217ENST00000541578 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-217ENST00000541578 SEC24BO95487 1268 aa10.96□□□□□ -0.65
SNHG1-217ENST00000541578 MKRN3Q13064 507 aaKnown RBP10.96□□□□□ -0.65
SNHG1-217ENST00000541578 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
SNHG1-217ENST00000541578 CABP2Q9NPB3 220 aa10.96□□□□□ -0.65
SNHG1-217ENST00000541578 LHX8Q68G74 356 aa10.95□□□□□ -0.66
SNHG1-217ENST00000541578 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
SNHG1-217ENST00000541578 COLQQ9Y215 455 aaPredicted RBP10.92□□□□□ -0.66
SNHG1-217ENST00000541578 STK25O00506 426 aa10.91□□□□□ -0.66
SNHG1-217ENST00000541578 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
SNHG1-217ENST00000541578 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
SNHG1-217ENST00000541578 PLCG2P16885 1265 aa10.9□□□□□ -0.66
SNHG1-217ENST00000541578 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
SNHG1-217ENST00000541578 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
SNHG1-217ENST00000541578 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
SNHG1-217ENST00000541578 EFCAB3Q8N7B9 438 aa10.88□□□□□ -0.67
SNHG1-217ENST00000541578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNHG1-217ENST00000541578 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
SNHG1-217ENST00000541578 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
SNHG1-217ENST00000541578 SOX12O15370 315 aa10.83□□□□□ -0.68
SNHG1-217ENST00000541578 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
SNHG1-217ENST00000541578 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
SNHG1-217ENST00000541578 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
SNHG1-217ENST00000541578 PDCD7Q8N8D1 485 aaKnown RBP10.81□□□□□ -0.68
SNHG1-217ENST00000541578 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
SNHG1-217ENST00000541578 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
SNHG1-217ENST00000541578 NLRP6P59044 892 aa10.76□□□□□ -0.69
SNHG1-217ENST00000541578 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-217ENST00000541578 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
SNHG1-217ENST00000541578 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
SNHG1-217ENST00000541578 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
SNHG1-217ENST00000541578 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
SNHG1-217ENST00000541578 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
SNHG1-217ENST00000541578 G3V3G9 751 aa10.71□□□□□ -0.69
SNHG1-217ENST00000541578 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
SNHG1-217ENST00000541578 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
SNHG1-217ENST00000541578 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
SNHG1-217ENST00000541578 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
SNHG1-217ENST00000541578 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
SNHG1-217ENST00000541578 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
SNHG1-217ENST00000541578 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-217ENST00000541578 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
SNHG1-217ENST00000541578 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
SNHG1-217ENST00000541578 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
SNHG1-217ENST00000541578 MICALL2Q8IY33 904 aa10.61□□□□□ -0.71
SNHG1-217ENST00000541578 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
SNHG1-217ENST00000541578 PPP1R37O75864 691 aa10.57□□□□□ -0.72
SNHG1-217ENST00000541578 GTPBP6O43824 516 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-217ENST00000541578 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SNHG1-217ENST00000541578 SNPHO15079 494 aa10.48□□□□□ -0.73
SNHG1-217ENST00000541578 TMEM92Q6UXU6 159 aa10.47□□□□□ -0.73
SNHG1-217ENST00000541578 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
SNHG1-217ENST00000541578 FAM163AQ96GL9 167 aaPredicted RBP10.45□□□□□ -0.74
SNHG1-217ENST00000541578 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms