RNA–Protein interactions for RNA: ENST00000541573.5

SOD2-213, Transcript of superoxide dismutase 2, humanhuman

TSL 4

Gene SOD2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-213ENST00000541573 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
SOD2-213ENST00000541573 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
SOD2-213ENST00000541573 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
SOD2-213ENST00000541573 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
SOD2-213ENST00000541573 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
SOD2-213ENST00000541573 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
SOD2-213ENST00000541573 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
SOD2-213ENST00000541573 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
SOD2-213ENST00000541573 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
SOD2-213ENST00000541573 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
SOD2-213ENST00000541573 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
SOD2-213ENST00000541573 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
SOD2-213ENST00000541573 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
SOD2-213ENST00000541573 STK25O00506 426 aa12.48□□□□□ -0.41
SOD2-213ENST00000541573 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
SOD2-213ENST00000541573 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
SOD2-213ENST00000541573 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
SOD2-213ENST00000541573 NBR1Q14596 966 aa12.45□□□□□ -0.42
SOD2-213ENST00000541573 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
SOD2-213ENST00000541573 PYGBP11216 843 aa12.4□□□□□ -0.42
SOD2-213ENST00000541573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
SOD2-213ENST00000541573 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
SOD2-213ENST00000541573 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
SOD2-213ENST00000541573 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
SOD2-213ENST00000541573 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
SOD2-213ENST00000541573 PITPNM1O00562 1244 aa12.33□□□□□ -0.44
SOD2-213ENST00000541573 RYDENQ9NUL5 291 aaKnown RBP12.25□□□□□ -0.45
SOD2-213ENST00000541573 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
SOD2-213ENST00000541573 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
SOD2-213ENST00000541573 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
SOD2-213ENST00000541573 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
SOD2-213ENST00000541573 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
SOD2-213ENST00000541573 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
SOD2-213ENST00000541573 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
SOD2-213ENST00000541573 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
SOD2-213ENST00000541573 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
SOD2-213ENST00000541573 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
SOD2-213ENST00000541573 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
SOD2-213ENST00000541573 PSEN1P49768 467 aa12.06□□□□□ -0.48
SOD2-213ENST00000541573 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
SOD2-213ENST00000541573 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
SOD2-213ENST00000541573 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
SOD2-213ENST00000541573 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
SOD2-213ENST00000541573 PPP1R37O75864 691 aa11.99□□□□□ -0.49
SOD2-213ENST00000541573 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
SOD2-213ENST00000541573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
SOD2-213ENST00000541573 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
SOD2-213ENST00000541573 MAP3K13O43283 966 aa11.94□□□□□ -0.5
SOD2-213ENST00000541573 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
SOD2-213ENST00000541573 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
SOD2-213ENST00000541573 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
SOD2-213ENST00000541573 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
SOD2-213ENST00000541573 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
SOD2-213ENST00000541573 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
SOD2-213ENST00000541573 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
SOD2-213ENST00000541573 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
SOD2-213ENST00000541573 NLRP6P59044 892 aa11.89□□□□□ -0.51
SOD2-213ENST00000541573 SOX12O15370 315 aa11.88□□□□□ -0.51
SOD2-213ENST00000541573 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
SOD2-213ENST00000541573 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
SOD2-213ENST00000541573 E2F4Q16254 413 aa11.85□□□□□ -0.51
SOD2-213ENST00000541573 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
SOD2-213ENST00000541573 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
SOD2-213ENST00000541573 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
SOD2-213ENST00000541573 SEMA3EO15041 775 aa11.8□□□□□ -0.52
SOD2-213ENST00000541573 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
SOD2-213ENST00000541573 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
SOD2-213ENST00000541573 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
SOD2-213ENST00000541573 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
SOD2-213ENST00000541573 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
SOD2-213ENST00000541573 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
SOD2-213ENST00000541573 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
SOD2-213ENST00000541573 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
SOD2-213ENST00000541573 PDE4AP27815 886 aa11.73□□□□□ -0.53
SOD2-213ENST00000541573 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
SOD2-213ENST00000541573 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
SOD2-213ENST00000541573 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
SOD2-213ENST00000541573 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
SOD2-213ENST00000541573 MFSD10Q14728 455 aa11.68□□□□□ -0.54
SOD2-213ENST00000541573 CRISPLD2Q9H0B8 497 aa11.68□□□□□ -0.54
SOD2-213ENST00000541573 SLC24A3Q9HC58 644 aa11.68□□□□□ -0.54
SOD2-213ENST00000541573 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
SOD2-213ENST00000541573 DDX27Q96GQ7 796 aaKnown RBP11.66□□□□□ -0.54
SOD2-213ENST00000541573 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
SOD2-213ENST00000541573 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
SOD2-213ENST00000541573 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
SOD2-213ENST00000541573 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
SOD2-213ENST00000541573 ABCC9O60706 1549 aa11.6□□□□□ -0.55
SOD2-213ENST00000541573 ZMYND10O75800 440 aa11.6□□□□□ -0.55
SOD2-213ENST00000541573 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
SOD2-213ENST00000541573 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
SOD2-213ENST00000541573 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
SOD2-213ENST00000541573 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
SOD2-213ENST00000541573 MLLT3P42568 568 aaPredicted RBP11.54□□□□□ -0.56
SOD2-213ENST00000541573 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
SOD2-213ENST00000541573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOD2-213ENST00000541573 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
SOD2-213ENST00000541573 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
SOD2-213ENST00000541573 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
SOD2-213ENST00000541573 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms