RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
SUDS3-202ENST00000541280 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
SUDS3-202ENST00000541280 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
SUDS3-202ENST00000541280 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
SUDS3-202ENST00000541280 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
SUDS3-202ENST00000541280 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
SUDS3-202ENST00000541280 MS4A3Q96HJ5 214 aa14.53□□□□□ -0.08
SUDS3-202ENST00000541280 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
SUDS3-202ENST00000541280 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
SUDS3-202ENST00000541280 MAP3K13O43283 966 aa14.46□□□□□ -0.09
SUDS3-202ENST00000541280 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
SUDS3-202ENST00000541280 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
SUDS3-202ENST00000541280 GSE1Q14687 1217 aa14.42□□□□□ -0.1
SUDS3-202ENST00000541280 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
SUDS3-202ENST00000541280 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
SUDS3-202ENST00000541280 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
SUDS3-202ENST00000541280 TIE1P35590 1138 aa14.34□□□□□ -0.11
SUDS3-202ENST00000541280 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
SUDS3-202ENST00000541280 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
SUDS3-202ENST00000541280 PYGBP11216 843 aa14.31□□□□□ -0.12
SUDS3-202ENST00000541280 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
SUDS3-202ENST00000541280 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
SUDS3-202ENST00000541280 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
SUDS3-202ENST00000541280 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
SUDS3-202ENST00000541280 LHX8Q68G74 356 aa14.26□□□□□ -0.13
SUDS3-202ENST00000541280 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
SUDS3-202ENST00000541280 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
SUDS3-202ENST00000541280 C7P10643 843 aa14.21□□□□□ -0.13
SUDS3-202ENST00000541280 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
SUDS3-202ENST00000541280 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
SUDS3-202ENST00000541280 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
SUDS3-202ENST00000541280 METRNQ9UJH8 293 aa14.18□□□□□ -0.14
SUDS3-202ENST00000541280 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SUDS3-202ENST00000541280 TMEM106CQ9BVX2 250 aa14.14□□□□□ -0.15
SUDS3-202ENST00000541280 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
SUDS3-202ENST00000541280 IER5LQ5T953 404 aa14.11□□□□□ -0.15
SUDS3-202ENST00000541280 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
SUDS3-202ENST00000541280 POTEFA5A3E0 1075 aa14.06□□□□□ -0.16
SUDS3-202ENST00000541280 PDAP1Q13442 181 aaKnown RBP14.03□□□□□ -0.16
SUDS3-202ENST00000541280 PSEN1P49768 467 aa14.02□□□□□ -0.17
SUDS3-202ENST00000541280 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
SUDS3-202ENST00000541280 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
SUDS3-202ENST00000541280 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
SUDS3-202ENST00000541280 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
SUDS3-202ENST00000541280 SEC24BO95487 1268 aa13.95□□□□□ -0.18
SUDS3-202ENST00000541280 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
SUDS3-202ENST00000541280 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
SUDS3-202ENST00000541280 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
SUDS3-202ENST00000541280 PKD2Q13563 968 aa13.9□□□□□ -0.18
SUDS3-202ENST00000541280 PLCG2P16885 1265 aa13.89□□□□□ -0.19
SUDS3-202ENST00000541280 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
SUDS3-202ENST00000541280 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
SUDS3-202ENST00000541280 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
SUDS3-202ENST00000541280 MKRN3Q13064 507 aaKnown RBP13.86□□□□□ -0.19
SUDS3-202ENST00000541280 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SUDS3-202ENST00000541280 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
SUDS3-202ENST00000541280 PDCD7Q8N8D1 485 aaKnown RBP13.83□□□□□ -0.2
SUDS3-202ENST00000541280 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
SUDS3-202ENST00000541280 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
SUDS3-202ENST00000541280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
SUDS3-202ENST00000541280 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
SUDS3-202ENST00000541280 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
SUDS3-202ENST00000541280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
SUDS3-202ENST00000541280 RGL2O15211 777 aa13.74□□□□□ -0.21
SUDS3-202ENST00000541280 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
SUDS3-202ENST00000541280 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
SUDS3-202ENST00000541280 SOX12O15370 315 aa13.67□□□□□ -0.22
SUDS3-202ENST00000541280 BCL11BQ9C0K0 894 aaPredicted RBP13.66□□□□□ -0.22
SUDS3-202ENST00000541280 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
SUDS3-202ENST00000541280 NISCHQ9Y2I1 1504 aa13.61□□□□□ -0.23
SUDS3-202ENST00000541280 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
SUDS3-202ENST00000541280 STK25O00506 426 aa13.6□□□□□ -0.23
SUDS3-202ENST00000541280 SLAIN1Q8ND83 568 aa13.6□□□□□ -0.23
SUDS3-202ENST00000541280 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
SUDS3-202ENST00000541280 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.24
SUDS3-202ENST00000541280 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
SUDS3-202ENST00000541280 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
SUDS3-202ENST00000541280 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
SUDS3-202ENST00000541280 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
SUDS3-202ENST00000541280 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
SUDS3-202ENST00000541280 NLRP6P59044 892 aa13.53□□□□□ -0.24
SUDS3-202ENST00000541280 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
SUDS3-202ENST00000541280 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
SUDS3-202ENST00000541280 G3V3G9 751 aa13.5□□□□□ -0.25
SUDS3-202ENST00000541280 LCE2DQ5TA82 110 aaPredicted RBP13.5□□□□□ -0.25
SUDS3-202ENST00000541280 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
SUDS3-202ENST00000541280 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
SUDS3-202ENST00000541280 FAM163AQ96GL9 167 aaPredicted RBP13.43□□□□□ -0.26
SUDS3-202ENST00000541280 SNPHO15079 494 aa13.42□□□□□ -0.26
SUDS3-202ENST00000541280 POTEMA6NI47 508 aa13.38□□□□□ -0.27
SUDS3-202ENST00000541280 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
SUDS3-202ENST00000541280 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
SUDS3-202ENST00000541280 ST18O60284 1047 aa13.35□□□□□ -0.27
SUDS3-202ENST00000541280 TMEM92Q6UXU6 159 aa13.34□□□□□ -0.27
SUDS3-202ENST00000541280 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
SUDS3-202ENST00000541280 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
SUDS3-202ENST00000541280 PPP1R37O75864 691 aa13.27□□□□□ -0.29
SUDS3-202ENST00000541280 HOXB3P14651 431 aaPredicted RBP13.27□□□□□ -0.29
SUDS3-202ENST00000541280 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
SUDS3-202ENST00000541280 KIF3CO14782 793 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms