RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
TTR-203ENST00000541025 DCBLD2Q96PD2 775 aa15.73■□□□□ 0.11
TTR-203ENST00000541025 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
TTR-203ENST00000541025 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
TTR-203ENST00000541025 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
TTR-203ENST00000541025 KIF12Q96FN5 646 aa15.67■□□□□ 0.1
TTR-203ENST00000541025 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
TTR-203ENST00000541025 DCAF8Q5TAQ9 597 aa15.61■□□□□ 0.09
TTR-203ENST00000541025 MAP3K13O43283 966 aa15.58■□□□□ 0.08
TTR-203ENST00000541025 IFNLR1Q8IU57 520 aaPredicted RBP15.57■□□□□ 0.08
TTR-203ENST00000541025 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
TTR-203ENST00000541025 GSE1Q14687 1217 aa15.53■□□□□ 0.08
TTR-203ENST00000541025 SPOCK2Q92563 424 aa15.52■□□□□ 0.08
TTR-203ENST00000541025 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
TTR-203ENST00000541025 ASTLQ6HA08 431 aaPredicted RBP15.48■□□□□ 0.07
TTR-203ENST00000541025 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
TTR-203ENST00000541025 LHX8Q68G74 356 aa15.44■□□□□ 0.06
TTR-203ENST00000541025 TIE1P35590 1138 aa15.43■□□□□ 0.06
TTR-203ENST00000541025 PYGBP11216 843 aa15.41■□□□□ 0.06
TTR-203ENST00000541025 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
TTR-203ENST00000541025 NISCHQ9Y2I1 1504 aa15.39■□□□□ 0.05
TTR-203ENST00000541025 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
TTR-203ENST00000541025 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
TTR-203ENST00000541025 CHRM1P11229 460 aaPredicted RBP15.38■□□□□ 0.05
TTR-203ENST00000541025 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
TTR-203ENST00000541025 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
TTR-203ENST00000541025 SLC39A7Q92504 469 aa15.36■□□□□ 0.05
TTR-203ENST00000541025 C7P10643 843 aa15.35■□□□□ 0.05
TTR-203ENST00000541025 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
TTR-203ENST00000541025 TTLL13PA6NNM8 815 aa15.31■□□□□ 0.04
TTR-203ENST00000541025 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
TTR-203ENST00000541025 ZNF467Q7Z7K2 595 aaPredicted RBP15.27■□□□□ 0.04
TTR-203ENST00000541025 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
TTR-203ENST00000541025 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
TTR-203ENST00000541025 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
TTR-203ENST00000541025 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
TTR-203ENST00000541025 IER5LQ5T953 404 aa15.18■□□□□ 0.02
TTR-203ENST00000541025 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
TTR-203ENST00000541025 SEC24BO95487 1268 aa15.11■□□□□ 0.01
TTR-203ENST00000541025 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
TTR-203ENST00000541025 PSEN1P49768 467 aa15.09■□□□□ 0.01
TTR-203ENST00000541025 PDAP1Q13442 181 aaKnown RBP15.08■□□□□ 0
TTR-203ENST00000541025 MAMSTRQ6ZN01 415 aa15.06■□□□□ 0
TTR-203ENST00000541025 OTUD5Q96G74 571 aa15.06■□□□□ 0
TTR-203ENST00000541025 COLQQ9Y215 455 aaPredicted RBP15.06■□□□□ 0
TTR-203ENST00000541025 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
TTR-203ENST00000541025 PLCG2P16885 1265 aa15□□□□□ -0.01
TTR-203ENST00000541025 IRX5P78411 483 aaPredicted RBP15□□□□□ -0.01
TTR-203ENST00000541025 GOLGA2Q08379 1002 aa15□□□□□ -0.01
TTR-203ENST00000541025 MKRN3Q13064 507 aaKnown RBP14.98□□□□□ -0.01
TTR-203ENST00000541025 OCEL1Q9H607 264 aa14.98□□□□□ -0.01
TTR-203ENST00000541025 SCUBE2Q9NQ36 999 aa14.95□□□□□ -0.02
TTR-203ENST00000541025 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
TTR-203ENST00000541025 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
TTR-203ENST00000541025 CABP2Q9NPB3 220 aa14.89□□□□□ -0.03
TTR-203ENST00000541025 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
TTR-203ENST00000541025 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
TTR-203ENST00000541025 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
TTR-203ENST00000541025 PKD2Q13563 968 aa14.86□□□□□ -0.03
TTR-203ENST00000541025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.03
TTR-203ENST00000541025 PDCD7Q8N8D1 485 aaKnown RBP14.82□□□□□ -0.04
TTR-203ENST00000541025 ILDR1Q86SU0 546 aaPredicted RBP14.81□□□□□ -0.04
TTR-203ENST00000541025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
TTR-203ENST00000541025 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
TTR-203ENST00000541025 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
TTR-203ENST00000541025 EFCAB3Q8N7B9 438 aa14.76□□□□□ -0.05
TTR-203ENST00000541025 SOX12O15370 315 aa14.73□□□□□ -0.05
TTR-203ENST00000541025 RGL2O15211 777 aa14.71□□□□□ -0.05
TTR-203ENST00000541025 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.71□□□□□ -0.05
TTR-203ENST00000541025 SLAIN1Q8ND83 568 aa14.7□□□□□ -0.06
TTR-203ENST00000541025 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
TTR-203ENST00000541025 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
TTR-203ENST00000541025 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
TTR-203ENST00000541025 G3V3G9 751 aa14.63□□□□□ -0.07
TTR-203ENST00000541025 STK25O00506 426 aa14.63□□□□□ -0.07
TTR-203ENST00000541025 C3orf67Q6ZVT6 689 aa14.63□□□□□ -0.07
TTR-203ENST00000541025 BOLA1Q9Y3E2 137 aa14.61□□□□□ -0.07
TTR-203ENST00000541025 FAM163AQ96GL9 167 aaPredicted RBP14.6□□□□□ -0.07
TTR-203ENST00000541025 NLRP6P59044 892 aa14.57□□□□□ -0.08
TTR-203ENST00000541025 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
TTR-203ENST00000541025 TMEM121BQ9BXQ6 578 aaPredicted RBP14.55□□□□□ -0.08
TTR-203ENST00000541025 SNPHO15079 494 aa14.53□□□□□ -0.08
TTR-203ENST00000541025 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
TTR-203ENST00000541025 FBXO22Q8NEZ5 403 aa14.49□□□□□ -0.09
TTR-203ENST00000541025 POTEMA6NI47 508 aa14.48□□□□□ -0.09
TTR-203ENST00000541025 LCE2DQ5TA82 110 aaPredicted RBP14.48□□□□□ -0.09
TTR-203ENST00000541025 MFRPQ9BY79 579 aa14.48□□□□□ -0.09
TTR-203ENST00000541025 POTEGQ6S5H5 508 aa14.47□□□□□ -0.09
TTR-203ENST00000541025 MICALL2Q8IY33 904 aa14.45□□□□□ -0.1
TTR-203ENST00000541025 HS6ST3Q8IZP7 471 aa14.44□□□□□ -0.1
TTR-203ENST00000541025 ST18O60284 1047 aa14.42□□□□□ -0.1
TTR-203ENST00000541025 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
TTR-203ENST00000541025 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
TTR-203ENST00000541025 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
TTR-203ENST00000541025 TMEM92Q6UXU6 159 aa14.3□□□□□ -0.12
TTR-203ENST00000541025 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
TTR-203ENST00000541025 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
TTR-203ENST00000541025 RYDENQ9NUL5 291 aaKnown RBP14.24□□□□□ -0.13
TTR-203ENST00000541025 PPP1R37O75864 691 aa14.23□□□□□ -0.13
TTR-203ENST00000541025 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms