RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
MDM2-226ENST00000540352 GSE1Q14687 1217 aa10.07□□□□□ -0.8
MDM2-226ENST00000540352 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
MDM2-226ENST00000540352 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
MDM2-226ENST00000540352 GABBR2O75899 941 aa10.03□□□□□ -0.8
MDM2-226ENST00000540352 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
MDM2-226ENST00000540352 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
MDM2-226ENST00000540352 PKD2Q13563 968 aa9.97□□□□□ -0.81
MDM2-226ENST00000540352 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
MDM2-226ENST00000540352 PYGBP11216 843 aa9.95□□□□□ -0.82
MDM2-226ENST00000540352 CCDC61Q9Y6R9 512 aa9.93□□□□□ -0.82
MDM2-226ENST00000540352 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
MDM2-226ENST00000540352 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
MDM2-226ENST00000540352 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
MDM2-226ENST00000540352 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
MDM2-226ENST00000540352 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
MDM2-226ENST00000540352 PLSCR2Q9NRY7 297 aa9.84□□□□□ -0.83
MDM2-226ENST00000540352 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
MDM2-226ENST00000540352 RGL2O15211 777 aa9.83□□□□□ -0.84
MDM2-226ENST00000540352 MAP3K13O43283 966 aa9.83□□□□□ -0.84
MDM2-226ENST00000540352 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
MDM2-226ENST00000540352 ZNF467Q7Z7K2 595 aaPredicted RBP9.82□□□□□ -0.84
MDM2-226ENST00000540352 RIOK3O14730 519 aaKnown RBP9.81□□□□□ -0.84
MDM2-226ENST00000540352 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
MDM2-226ENST00000540352 CLCN6P51797 869 aa9.79□□□□□ -0.84
MDM2-226ENST00000540352 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
MDM2-226ENST00000540352 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
MDM2-226ENST00000540352 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
MDM2-226ENST00000540352 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
MDM2-226ENST00000540352 IFNL1Q8IU54 200 aa9.77□□□□□ -0.85
MDM2-226ENST00000540352 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
MDM2-226ENST00000540352 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
MDM2-226ENST00000540352 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
MDM2-226ENST00000540352 CHGAP10645 457 aaKnown RBP9.7□□□□□ -0.86
MDM2-226ENST00000540352 PSEN1P49768 467 aa9.7□□□□□ -0.86
MDM2-226ENST00000540352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.69□□□□□ -0.86
MDM2-226ENST00000540352 STK25O00506 426 aa9.69□□□□□ -0.86
MDM2-226ENST00000540352 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
MDM2-226ENST00000540352 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
MDM2-226ENST00000540352 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
MDM2-226ENST00000540352 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
MDM2-226ENST00000540352 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.86
MDM2-226ENST00000540352 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
MDM2-226ENST00000540352 TIE1P35590 1138 aa9.63□□□□□ -0.87
MDM2-226ENST00000540352 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
MDM2-226ENST00000540352 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
MDM2-226ENST00000540352 BMP2KQ9NSY1 1161 aaPredicted RBP9.61□□□□□ -0.87
MDM2-226ENST00000540352 TTLL13PA6NNM8 815 aa9.6□□□□□ -0.87
MDM2-226ENST00000540352 CABP2Q9NPB3 220 aa9.6□□□□□ -0.87
MDM2-226ENST00000540352 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
MDM2-226ENST00000540352 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
MDM2-226ENST00000540352 ATMINO43313 823 aaPredicted RBP9.56□□□□□ -0.88
MDM2-226ENST00000540352 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
MDM2-226ENST00000540352 ATN1P54259 1190 aaPredicted RBP9.55□□□□□ -0.88
MDM2-226ENST00000540352 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
MDM2-226ENST00000540352 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
MDM2-226ENST00000540352 ASTLQ6HA08 431 aaPredicted RBP9.54□□□□□ -0.88
MDM2-226ENST00000540352 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
MDM2-226ENST00000540352 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
MDM2-226ENST00000540352 POTEMA6NI47 508 aa9.52□□□□□ -0.89
MDM2-226ENST00000540352 DNAJC5Q9H3Z4 198 aa9.52□□□□□ -0.89
MDM2-226ENST00000540352 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
MDM2-226ENST00000540352 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
MDM2-226ENST00000540352 SOX12O15370 315 aa9.46□□□□□ -0.9
MDM2-226ENST00000540352 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
MDM2-226ENST00000540352 SLC39A7Q92504 469 aa9.46□□□□□ -0.9
MDM2-226ENST00000540352 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
MDM2-226ENST00000540352 SEC24BO95487 1268 aa9.45□□□□□ -0.9
MDM2-226ENST00000540352 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
MDM2-226ENST00000540352 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
MDM2-226ENST00000540352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.96e-12■■□□□ 11.5
MDM2-226ENST00000540352 PHF8Q9UPP1 1060 aa9.45□□□□□ -0.9
MDM2-226ENST00000540352 NLRP6P59044 892 aa9.44□□□□□ -0.9
MDM2-226ENST00000540352 IER5LQ5T953 404 aa9.44□□□□□ -0.9
MDM2-226ENST00000540352 PLCG2P16885 1265 aa9.43□□□□□ -0.9
MDM2-226ENST00000540352 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
MDM2-226ENST00000540352 MFRPQ9BY79 579 aa9.43□□□□□ -0.9
MDM2-226ENST00000540352 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
MDM2-226ENST00000540352 C7P10643 843 aa9.41□□□□□ -0.9
MDM2-226ENST00000540352 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
MDM2-226ENST00000540352 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
MDM2-226ENST00000540352 PLCB2Q00722 1185 aa9.38□□□□□ -0.91
MDM2-226ENST00000540352 ILDR1Q86SU0 546 aaPredicted RBP9.38□□□□□ -0.91
MDM2-226ENST00000540352 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
MDM2-226ENST00000540352 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
MDM2-226ENST00000540352 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
MDM2-226ENST00000540352 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
MDM2-226ENST00000540352 G3V3G9 751 aa9.35□□□□□ -0.91
MDM2-226ENST00000540352 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
MDM2-226ENST00000540352 MS4A4AQ96JQ5 239 aa9.34□□□□□ -0.91
MDM2-226ENST00000540352 POTEJP0CG39 1038 aa9.33□□□□□ -0.92
MDM2-226ENST00000540352 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
MDM2-226ENST00000540352 DPY19L2Q6NUT2 758 aa9.32□□□□□ -0.92
MDM2-226ENST00000540352 POTEFA5A3E0 1075 aa9.31□□□□□ -0.92
MDM2-226ENST00000540352 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
MDM2-226ENST00000540352 PPP1R37O75864 691 aa9.3□□□□□ -0.92
MDM2-226ENST00000540352 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
MDM2-226ENST00000540352 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
MDM2-226ENST00000540352 MICALL2Q8IY33 904 aa9.25□□□□□ -0.93
MDM2-226ENST00000540352 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms