RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
SPARCL1-208ENST00000535835 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
SPARCL1-208ENST00000535835 METRNQ9UJH8 293 aa10.56□□□□□ -0.72
SPARCL1-208ENST00000535835 C7P10643 843 aa10.55□□□□□ -0.72
SPARCL1-208ENST00000535835 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
SPARCL1-208ENST00000535835 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
SPARCL1-208ENST00000535835 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
SPARCL1-208ENST00000535835 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
SPARCL1-208ENST00000535835 SCUBE2Q9NQ36 999 aa10.48□□□□□ -0.73
SPARCL1-208ENST00000535835 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
SPARCL1-208ENST00000535835 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
SPARCL1-208ENST00000535835 FKBP8Q14318 412 aa10.38□□□□□ -0.75
SPARCL1-208ENST00000535835 ATN1P54259 1190 aaPredicted RBP10.37□□□□□ -0.75
SPARCL1-208ENST00000535835 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
SPARCL1-208ENST00000535835 MIER1Q8N108 512 aa10.32□□□□□ -0.76
SPARCL1-208ENST00000535835 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
SPARCL1-208ENST00000535835 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
SPARCL1-208ENST00000535835 CDAN1Q8IWY9 1227 aa10.28□□□□□ -0.76
SPARCL1-208ENST00000535835 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
SPARCL1-208ENST00000535835 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
SPARCL1-208ENST00000535835 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
SPARCL1-208ENST00000535835 SEC24BO95487 1268 aa10.25□□□□□ -0.77
SPARCL1-208ENST00000535835 TIE1P35590 1138 aa10.23□□□□□ -0.77
SPARCL1-208ENST00000535835 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
SPARCL1-208ENST00000535835 NUBP1P53384 320 aa10.22□□□□□ -0.77
SPARCL1-208ENST00000535835 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
SPARCL1-208ENST00000535835 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
SPARCL1-208ENST00000535835 MAP3K13O43283 966 aa10.19□□□□□ -0.78
SPARCL1-208ENST00000535835 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
SPARCL1-208ENST00000535835 TTLL13PA6NNM8 815 aa10.15□□□□□ -0.78
SPARCL1-208ENST00000535835 IER5LQ5T953 404 aa10.13□□□□□ -0.79
SPARCL1-208ENST00000535835 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
SPARCL1-208ENST00000535835 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
SPARCL1-208ENST00000535835 ST18O60284 1047 aa10.11□□□□□ -0.79
SPARCL1-208ENST00000535835 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
SPARCL1-208ENST00000535835 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
SPARCL1-208ENST00000535835 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
SPARCL1-208ENST00000535835 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
SPARCL1-208ENST00000535835 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
SPARCL1-208ENST00000535835 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
SPARCL1-208ENST00000535835 FAM212AQ96EL1 285 aa10.04□□□□□ -0.8
SPARCL1-208ENST00000535835 IFNL1Q8IU54 200 aa10.03□□□□□ -0.8
SPARCL1-208ENST00000535835 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.81
SPARCL1-208ENST00000535835 PLCG2P16885 1265 aa10.01□□□□□ -0.81
SPARCL1-208ENST00000535835 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
SPARCL1-208ENST00000535835 SNPHO15079 494 aa9.97□□□□□ -0.81
SPARCL1-208ENST00000535835 TMEM106CQ9BVX2 250 aa9.97□□□□□ -0.81
SPARCL1-208ENST00000535835 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.82
SPARCL1-208ENST00000535835 PYGBP11216 843 aa9.95□□□□□ -0.82
SPARCL1-208ENST00000535835 IRX5P78411 483 aaPredicted RBP9.91□□□□□ -0.82
SPARCL1-208ENST00000535835 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
SPARCL1-208ENST00000535835 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
SPARCL1-208ENST00000535835 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
SPARCL1-208ENST00000535835 OCEL1Q9H607 264 aa9.9□□□□□ -0.82
SPARCL1-208ENST00000535835 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.9□□□□□ -0.82
SPARCL1-208ENST00000535835 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
SPARCL1-208ENST00000535835 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
SPARCL1-208ENST00000535835 GSE1Q14687 1217 aa9.85□□□□□ -0.83
SPARCL1-208ENST00000535835 EMP3P54852 163 aa9.81□□□□□ -0.84
SPARCL1-208ENST00000535835 SPOCK2Q92563 424 aa9.81□□□□□ -0.84
SPARCL1-208ENST00000535835 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
SPARCL1-208ENST00000535835 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
SPARCL1-208ENST00000535835 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
SPARCL1-208ENST00000535835 FAM205CA6NFA0 338 aa9.73□□□□□ -0.85
SPARCL1-208ENST00000535835 PDCD7Q8N8D1 485 aaKnown RBP9.73□□□□□ -0.85
SPARCL1-208ENST00000535835 PSEN1P49768 467 aa9.72□□□□□ -0.85
SPARCL1-208ENST00000535835 L3MBTL3Q96JM7 780 aaPredicted RBP9.72□□□□□ -0.85
SPARCL1-208ENST00000535835 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
SPARCL1-208ENST00000535835 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
SPARCL1-208ENST00000535835 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
SPARCL1-208ENST00000535835 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
SPARCL1-208ENST00000535835 POTEB3A0JP26 581 aa9.68□□□□□ -0.86
SPARCL1-208ENST00000535835 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
SPARCL1-208ENST00000535835 POTEBQ6S5H4 581 aa9.68□□□□□ -0.86
SPARCL1-208ENST00000535835 ILDR1Q86SU0 546 aaPredicted RBP9.68□□□□□ -0.86
SPARCL1-208ENST00000535835 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
SPARCL1-208ENST00000535835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPARCL1-208ENST00000535835 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
SPARCL1-208ENST00000535835 DPY19L2Q6NUT2 758 aa9.59□□□□□ -0.87
SPARCL1-208ENST00000535835 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
SPARCL1-208ENST00000535835 CABP2Q9NPB3 220 aa9.59□□□□□ -0.87
SPARCL1-208ENST00000535835 G3V3G9 751 aa9.55□□□□□ -0.88
SPARCL1-208ENST00000535835 ZNF710Q8N1W2 664 aa9.55□□□□□ -0.88
SPARCL1-208ENST00000535835 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
SPARCL1-208ENST00000535835 ERBB3P21860 1342 aa9.54□□□□□ -0.88
SPARCL1-208ENST00000535835 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
SPARCL1-208ENST00000535835 EFCAB3Q8N7B9 438 aa9.51□□□□□ -0.89
SPARCL1-208ENST00000535835 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
SPARCL1-208ENST00000535835 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
SPARCL1-208ENST00000535835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
SPARCL1-208ENST00000535835 DOK7Q18PE1 504 aa9.48□□□□□ -0.89
SPARCL1-208ENST00000535835 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
SPARCL1-208ENST00000535835 MYT1LQ9UL68 1186 aa9.48□□□□□ -0.89
SPARCL1-208ENST00000535835 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
SPARCL1-208ENST00000535835 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
SPARCL1-208ENST00000535835 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
SPARCL1-208ENST00000535835 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
SPARCL1-208ENST00000535835 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
SPARCL1-208ENST00000535835 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
SPARCL1-208ENST00000535835 SOX12O15370 315 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms