RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
SNHG1-202ENST00000535689 SLC24A1O60721 1099 aa7.93□□□□□ -1.14
SNHG1-202ENST00000535689 CD44P16070 742 aaKnown RBP7.91□□□□□ -1.14
SNHG1-202ENST00000535689 PKD2Q13563 968 aa7.9□□□□□ -1.14
SNHG1-202ENST00000535689 DCAF8Q5TAQ9 597 aa7.9□□□□□ -1.14
SNHG1-202ENST00000535689 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-202ENST00000535689 PAK3O75914 559 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-202ENST00000535689 ZRANB1Q9UGI0 708 aa7.85□□□□□ -1.15
SNHG1-202ENST00000535689 RASEFQ8IZ41 740 aa7.83□□□□□ -1.16
SNHG1-202ENST00000535689 TSPYL2Q9H2G4 693 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-202ENST00000535689 NUBP1P53384 320 aa7.82□□□□□ -1.16
SNHG1-202ENST00000535689 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-202ENST00000535689 BBXQ8WY36 941 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-202ENST00000535689 PHF12Q96QT6 1004 aa7.81□□□□□ -1.16
SNHG1-202ENST00000535689 GABBR2O75899 941 aa7.8□□□□□ -1.16
SNHG1-202ENST00000535689 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
SNHG1-202ENST00000535689 ZNF579Q8NAF0 562 aaKnown RBP7.77□□□□□ -1.17
SNHG1-202ENST00000535689 RYDENQ9NUL5 291 aaKnown RBP7.77□□□□□ -1.17
SNHG1-202ENST00000535689 RIOK3O14730 519 aaKnown RBP7.75□□□□□ -1.17
SNHG1-202ENST00000535689 VGFO15240 615 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-202ENST00000535689 RGL2O15211 777 aa7.74□□□□□ -1.17
SNHG1-202ENST00000535689 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-202ENST00000535689 ZNF467Q7Z7K2 595 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-202ENST00000535689 CCDC61Q9Y6R9 512 aa7.74□□□□□ -1.17
SNHG1-202ENST00000535689 CHGAP10645 457 aaKnown RBP7.72□□□□□ -1.17
SNHG1-202ENST00000535689 SPRYD3Q8NCJ5 442 aa7.71□□□□□ -1.18
SNHG1-202ENST00000535689 MS4A3Q96HJ5 214 aa7.7□□□□□ -1.18
SNHG1-202ENST00000535689 SGIP1Q9BQI5 828 aa7.7□□□□□ -1.18
SNHG1-202ENST00000535689 POTEIP0CG38 1075 aa7.69□□□□□ -1.18
SNHG1-202ENST00000535689 HS6ST3Q8IZP7 471 aa7.69□□□□□ -1.18
SNHG1-202ENST00000535689 MAP3K13O43283 966 aa7.67□□□□□ -1.18
SNHG1-202ENST00000535689 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-202ENST00000535689 KIF12Q96FN5 646 aa7.67□□□□□ -1.18
SNHG1-202ENST00000535689 TRPC6Q9Y210 931 aa7.67□□□□□ -1.18
SNHG1-202ENST00000535689 PYGBP11216 843 aa7.66□□□□□ -1.18
SNHG1-202ENST00000535689 CLCN6P51797 869 aa7.66□□□□□ -1.18
SNHG1-202ENST00000535689 DNAJC5Q9H3Z4 198 aa7.66□□□□□ -1.18
SNHG1-202ENST00000535689 STK25O00506 426 aa7.65□□□□□ -1.18
SNHG1-202ENST00000535689 PAXIP1Q6ZW49 1069 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-202ENST00000535689 VSIG10Q8N0Z9 540 aa7.64□□□□□ -1.19
SNHG1-202ENST00000535689 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
SNHG1-202ENST00000535689 PDAP1Q13442 181 aaKnown RBP7.62□□□□□ -1.19
SNHG1-202ENST00000535689 DCBLD2Q96PD2 775 aa7.6□□□□□ -1.19
SNHG1-202ENST00000535689 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
SNHG1-202ENST00000535689 STK24Q9Y6E0 443 aa7.6□□□□□ -1.19
SNHG1-202ENST00000535689 LHX8Q68G74 356 aa7.59□□□□□ -1.19
SNHG1-202ENST00000535689 IFNL1Q8IU54 200 aa7.59□□□□□ -1.19
SNHG1-202ENST00000535689 PELP1Q8IZL8 1130 aaKnown RBP7.58□□□□□ -1.2
SNHG1-202ENST00000535689 RNF25Q96BH1 459 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-202ENST00000535689 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-202ENST00000535689 PCDHB8Q9UN66 801 aa7.57□□□□□ -1.2
SNHG1-202ENST00000535689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-202ENST00000535689 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-202ENST00000535689 BMP2KQ9NSY1 1161 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-202ENST00000535689 ATMINO43313 823 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-202ENST00000535689 PSEN1P49768 467 aa7.54□□□□□ -1.2
SNHG1-202ENST00000535689 ATN1P54259 1190 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-202ENST00000535689 GOLGA2Q08379 1002 aa7.54□□□□□ -1.2
SNHG1-202ENST00000535689 TTLL13PA6NNM8 815 aa7.51□□□□□ -1.21
SNHG1-202ENST00000535689 ASTLQ6HA08 431 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-202ENST00000535689 SOX12O15370 315 aa7.5□□□□□ -1.21
SNHG1-202ENST00000535689 TIE1P35590 1138 aa7.49□□□□□ -1.21
SNHG1-202ENST00000535689 TMEM106CQ9BVX2 250 aa7.48□□□□□ -1.21
SNHG1-202ENST00000535689 NLRP6P59044 892 aa7.47□□□□□ -1.21
SNHG1-202ENST00000535689 BCANQ96GW7 911 aa7.47□□□□□ -1.21
SNHG1-202ENST00000535689 TRIM35Q9UPQ4 493 aa7.47□□□□□ -1.21
SNHG1-202ENST00000535689 POTEB2H3BUK9 544 aa7.46□□□□□ -1.22
SNHG1-202ENST00000535689 POTEFA5A3E0 1075 aa7.45□□□□□ -1.22
SNHG1-202ENST00000535689 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-202ENST00000535689 MKRN3Q13064 507 aaKnown RBP7.45□□□□□ -1.22
SNHG1-202ENST00000535689 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
SNHG1-202ENST00000535689 WDR70Q9NW82 654 aa7.43□□□□□ -1.22
SNHG1-202ENST00000535689 CABP2Q9NPB3 220 aa7.42□□□□□ -1.22
SNHG1-202ENST00000535689 SLC39A7Q92504 469 aa7.41□□□□□ -1.22
SNHG1-202ENST00000535689 COLQQ9Y215 455 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-202ENST00000535689 NKX1-1Q15270 411 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-202ENST00000535689 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
SNHG1-202ENST00000535689 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
SNHG1-202ENST00000535689 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
SNHG1-202ENST00000535689 C7P10643 843 aa7.38□□□□□ -1.23
SNHG1-202ENST00000535689 NBR1Q14596 966 aa7.37□□□□□ -1.23
SNHG1-202ENST00000535689 EFCAB3Q8N7B9 438 aa7.36□□□□□ -1.23
SNHG1-202ENST00000535689 G3V3G9 751 aa7.35□□□□□ -1.23
SNHG1-202ENST00000535689 SEC24BO95487 1268 aa7.34□□□□□ -1.23
SNHG1-202ENST00000535689 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-202ENST00000535689 MFRPQ9BY79 579 aa7.33□□□□□ -1.24
SNHG1-202ENST00000535689 IER5LQ5T953 404 aa7.32□□□□□ -1.24
SNHG1-202ENST00000535689 OTUD5Q96G74 571 aa7.32□□□□□ -1.24
SNHG1-202ENST00000535689 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-202ENST00000535689 PDE4AP27815 886 aa7.31□□□□□ -1.24
SNHG1-202ENST00000535689 KDM2AQ9Y2K7 1162 aa7.31□□□□□ -1.24
SNHG1-202ENST00000535689 PLCG2P16885 1265 aa7.3□□□□□ -1.24
SNHG1-202ENST00000535689 DPY19L2Q6NUT2 758 aa7.3□□□□□ -1.24
SNHG1-202ENST00000535689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.3□□□□□ -1.24
SNHG1-202ENST00000535689 PHF8Q9UPP1 1060 aa7.3□□□□□ -1.24
SNHG1-202ENST00000535689 PDCD7Q8N8D1 485 aaKnown RBP7.29□□□□□ -1.24
SNHG1-202ENST00000535689 FBXO22Q8NEZ5 403 aa7.29□□□□□ -1.24
SNHG1-202ENST00000535689 L3MBTL3Q96JM7 780 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-202ENST00000535689 OCEL1Q9H607 264 aa7.27□□□□□ -1.25
SNHG1-202ENST00000535689 MAMSTRQ6ZN01 415 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms